Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 AL138966.2-201ENST00000621997 464 ntBASIC18.79■□□□□ 0.6
RCCD1A6NED2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 AC141257.4-201ENST00000634557 245 ntBASIC18.79■□□□□ 0.6
RCCD1A6NED2 AC136944.6-201ENST00000634818 245 ntBASIC18.79■□□□□ 0.6
RCCD1A6NED2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 BX276092.7-203ENST00000637198 1536 ntBASIC18.79■□□□□ 0.6
RCCD1A6NED2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RCCD1A6NED2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.79■□□□□ 0.6
RCCD1A6NED2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 RNF216P1-203ENST00000404404 2427 ntBASIC18.78■□□□□ 0.6
RCCD1A6NED2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 AC009154.2-201ENST00000621177 724 ntBASIC18.78■□□□□ 0.6
RCCD1A6NED2 AL023973.1-201ENST00000624619 620 ntBASIC18.78■□□□□ 0.6
RCCD1A6NED2 AP006294.2-201ENST00000641667 209 ntBASIC18.78■□□□□ 0.6
RCCD1A6NED2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RCCD1A6NED2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.78■□□□□ 0.6
RCCD1A6NED2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 AP000523.1-201ENST00000398242 1049 ntBASIC18.77■□□□□ 0.6
RCCD1A6NED2 RASA4DP-201ENST00000460726 1199 ntBASIC18.77■□□□□ 0.6
RCCD1A6NED2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 AC093827.2-201ENST00000512654 315 ntBASIC18.77■□□□□ 0.6
RCCD1A6NED2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 MIR4497-201ENST00000583208 89 ntBASIC18.77■□□□□ 0.6
RCCD1A6NED2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.77■□□□□ 0.6
RCCD1A6NED2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RCCD1A6NED2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.77■□□□□ 0.59
RCCD1A6NED2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RCCD1A6NED2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RCCD1A6NED2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.77■□□□□ 0.59
RCCD1A6NED2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
RCCD1A6NED2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RCCD1A6NED2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RCCD1A6NED2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RCCD1A6NED2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.76■□□□□ 0.59
RCCD1A6NED2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RCCD1A6NED2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms