Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 AC026691.1-201ENST00000602502 2017 ntBASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 GPAT2P1-201ENST00000444924 1672 ntBASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 B3GAT3P1-201ENST00000471720 806 ntBASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGB1Q9Y5G3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AC008894.3-201ENST00000624324 3103 ntBASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AC012618.2-201ENST00000428058 849 ntBASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AC011506.1-201ENST00000474329 610 ntBASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 CA15P1-201ENST00000481698 905 ntBASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AC233702.5-201ENST00000584107 538 ntBASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AL596257.1-201ENST00000641463 2694 ntBASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB1Q9Y5G3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms