Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 IL9RP2-201ENST00000423948 1312 ntBASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 AC079776.2-201ENST00000641154 1609 ntBASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 ABALON-201ENST00000629058 1903 ntBASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 OR7E14P-202ENST00000530490 1290 ntBASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 MTDHP4-201ENST00000600287 670 ntBASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 AC025062.2-201ENST00000605477 670 ntBASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 MIR7706-201ENST00000613747 67 ntBASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 AC138028.4-201ENST00000564984 1845 ntBASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 KRT18P55-202ENST00000578578 1546 ntBASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LINC00588Q9Y4M8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 AL049757.1-201ENST00000616842 1596 ntBASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 AC243591.1-201ENST00000452967 1364 ntBASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 AC139887.3-201ENST00000568585 713 ntBASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 BICD1-207ENST00000551848 1962 ntBASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00588Q9Y4M8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms