Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GRAMD1AQ96CP6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
GRAMD1AQ96CP6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
GRAMD1AQ96CP6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
GRAMD1AQ96CP6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GRAMD1AQ96CP6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 NPAP1P7-201ENST00000613027 823 ntBASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 CR769767.2-201ENST00000622735 460 ntBASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 KRT18P55-202ENST00000578578 1546 ntBASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.18■□□□□ 0.5
GRAMD1AQ96CP6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 AL645929.1-201ENST00000420084 975 ntBASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 SPDYE15P-201ENST00000424157 909 ntBASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 RASA4DP-201ENST00000460726 1199 ntBASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 MIR3652-201ENST00000579335 131 ntBASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRAMD1AQ96CP6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRAMD1AQ96CP6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms