Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCLL1Q8TB92 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 AL138688.1-201ENST00000624851 1594 ntBASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCLL1Q8TB92 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 AC133963.1-201ENST00000504166 1679 ntBASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 AC011840.4-201ENST00000578471 627 ntBASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGCLL1Q8TB92 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
HMGCLL1Q8TB92 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCLL1Q8TB92 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCLL1Q8TB92 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGCLL1Q8TB92 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCLL1Q8TB92 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 VENTXP7-201ENST00000475503 772 ntBASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
HMGCLL1Q8TB92 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms