Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 AL096865.1-201ENST00000606796 927 ntBASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDC42BPAQ5VT25 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC26.51■■□□□ 1.84
CDC42BPAQ5VT25 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC26.51■■□□□ 1.84
CDC42BPAQ5VT25 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 BCRP1-201ENST00000444246 691 ntBASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 THTPA-204ENST00000554970 569 ntTSL 4 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 THTPA-206ENST00000556015 535 ntTSL 3 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 HLA-DQB1-201ENST00000374943 1656 ntBASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 AL135999.2-201ENST00000622438 1686 ntBASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 SLBP-205ENST00000488267 987 ntTSL 2 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 RPL28-209ENST00000560055 670 ntTSL 3 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC26.51■■□□□ 1.83
CDC42BPAQ5VT25 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 REXO1L9P-201ENST00000604264 2108 ntBASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CDC42BPAQ5VT25 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 AMT-250ENST00000637682 1823 ntTSL 5 BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDC42BPAQ5VT25 AL020996.1-203ENST00000536896 2307 ntBASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 AL355306.1-201ENST00000415580 579 ntBASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 AC140658.5-201ENST00000438532 169 ntBASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 LHX6-205ENST00000464484 666 ntTSL 2 BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CDC42BPAQ5VT25 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 AC093503.3-201ENST00000624917 2352 ntBASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 MADD-208ENST00000405573 1823 ntTSL 5 BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 NEK7-201ENST00000367383 586 ntTSL 2 BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms