Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SEC61A1P61619 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.54■□□□□ 0.08
SEC61A1P61619 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.54■□□□□ 0.08
SEC61A1P61619 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.54■□□□□ 0.08
SEC61A1P61619 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.54■□□□□ 0.08
SEC61A1P61619 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.54■□□□□ 0.08
SEC61A1P61619 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.54■□□□□ 0.08
SEC61A1P61619 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SEC61A1P61619 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SEC61A1P61619 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SEC61A1P61619 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SEC61A1P61619 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.53■□□□□ 0.08
SEC61A1P61619 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.53■□□□□ 0.08
SEC61A1P61619 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.53■□□□□ 0.08
SEC61A1P61619 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
SEC61A1P61619 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 AC112907.2-201ENST00000448639 330 ntBASIC15.53■□□□□ 0.08
SEC61A1P61619 AL671277.2-201ENST00000458060 996 ntBASIC15.53■□□□□ 0.08
SEC61A1P61619 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.53■□□□□ 0.08
SEC61A1P61619 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.53■□□□□ 0.08
SEC61A1P61619 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.53■□□□□ 0.08
SEC61A1P61619 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.53■□□□□ 0.08
SEC61A1P61619 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.53■□□□□ 0.08
SEC61A1P61619 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.53■□□□□ 0.08
SEC61A1P61619 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.53■□□□□ 0.08
SEC61A1P61619 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.53■□□□□ 0.08
SEC61A1P61619 AL358472.4-201ENST00000633140 710 ntBASIC15.53■□□□□ 0.08
SEC61A1P61619 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.53■□□□□ 0.08
SEC61A1P61619 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 AL109659.2-201ENST00000606809 1674 ntBASIC15.53■□□□□ 0.08
SEC61A1P61619 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.53■□□□□ 0.08
SEC61A1P61619 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SEC61A1P61619 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.52■□□□□ 0.08
SEC61A1P61619 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.52■□□□□ 0.08
SEC61A1P61619 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.52■□□□□ 0.08
SEC61A1P61619 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SEC61A1P61619 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
SEC61A1P61619 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.52■□□□□ 0.08
SEC61A1P61619 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SEC61A1P61619 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SEC61A1P61619 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SEC61A1P61619 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SEC61A1P61619 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.52■□□□□ 0.07
SEC61A1P61619 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms