Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
MSI1O43347 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.38■□□□□ 0.53
MSI1O43347 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.38■□□□□ 0.53
MSI1O43347 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.38■□□□□ 0.53
MSI1O43347 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
MSI1O43347 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MSI1O43347 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MSI1O43347 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MSI1O43347 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
MSI1O43347 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.37■□□□□ 0.53
MSI1O43347 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MSI1O43347 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 HTR7P1-202ENST00000624664 4411 ntBASIC18.37■□□□□ 0.53
MSI1O43347 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.37■□□□□ 0.53
MSI1O43347 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MSI1O43347 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.37■□□□□ 0.53
MSI1O43347 ABCD1P5-201ENST00000445663 754 ntBASIC18.37■□□□□ 0.53
MSI1O43347 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.37■□□□□ 0.53
MSI1O43347 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MSI1O43347 AL121912.1-201ENST00000603683 238 ntBASIC18.37■□□□□ 0.53
MSI1O43347 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 BX276092.7-203ENST00000637198 1536 ntBASIC18.37■□□□□ 0.53
MSI1O43347 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.37■□□□□ 0.53
MSI1O43347 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
MSI1O43347 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MSI1O43347 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.37■□□□□ 0.53
MSI1O43347 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSI1O43347 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.36■□□□□ 0.53
MSI1O43347 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MSI1O43347 HCG11-201ENST00000411553 5696 ntBASIC18.36■□□□□ 0.53
MSI1O43347 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
MSI1O43347 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MSI1O43347 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
MSI1O43347 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.36■□□□□ 0.53
MSI1O43347 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.36■□□□□ 0.53
MSI1O43347 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.36■□□□□ 0.53
MSI1O43347 AC106795.1-205ENST00000512851 1056 ntBASIC18.36■□□□□ 0.53
MSI1O43347 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.36■□□□□ 0.53
MSI1O43347 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.36■□□□□ 0.53
MSI1O43347 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 MTDHP3-201ENST00000594186 672 ntBASIC18.36■□□□□ 0.53
MSI1O43347 AC104692.2-201ENST00000603054 253 ntBASIC18.36■□□□□ 0.53
MSI1O43347 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MSI1O43347 AL133373.2-201ENST00000623187 2828 ntBASIC18.36■□□□□ 0.53
MSI1O43347 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSI1O43347 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 REXO1L11P-201ENST00000620964 1927 ntBASIC18.35■□□□□ 0.53
MSI1O43347 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.35■□□□□ 0.53
MSI1O43347 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
MSI1O43347 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
MSI1O43347 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.35■□□□□ 0.53
MSI1O43347 AC006116.8-202ENST00000587620 1550 ntBASIC18.35■□□□□ 0.53
MSI1O43347 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.35■□□□□ 0.53
MSI1O43347 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.35■□□□□ 0.53
MSI1O43347 AP005117.1-201ENST00000584346 1413 ntBASIC18.35■□□□□ 0.53
MSI1O43347 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.35■□□□□ 0.53
MSI1O43347 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.35■□□□□ 0.53
MSI1O43347 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSI1O43347 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.35■□□□□ 0.53
MSI1O43347 FGFR3P6-201ENST00000457012 610 ntBASIC18.35■□□□□ 0.53
MSI1O43347 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.35■□□□□ 0.53
MSI1O43347 AC009078.2-202ENST00000463353 338 ntBASIC18.35■□□□□ 0.53
MSI1O43347 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms