Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Rps4l-201ENSMUST00000071745 943 ntBASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Gm10819-201ENSMUST00000099988 561 ntBASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Gm5682-201ENSMUST00000173402 505 ntBASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Gm9682-201ENSMUST00000197505 556 ntBASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5-4A0A075B652 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trav5-4A0A075B652 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Gm11452-201ENSMUST00000122376 690 ntBASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms