Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm27704-201ENSMUST00000185094 107 ntBASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms