Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RYDENQ9NUL5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 MAPK10-379ENST00000642013 1385 ntBASIC16.27■□□□□ 0.2
RYDENQ9NUL5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 AC003669.1-201ENST00000334569 611 ntBASIC16.27■□□□□ 0.2
RYDENQ9NUL5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 AL121912.1-201ENST00000603683 238 ntBASIC16.27■□□□□ 0.2
RYDENQ9NUL5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RYDENQ9NUL5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RYDENQ9NUL5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 PMPCAP1-201ENST00000508114 1576 ntBASIC16.26■□□□□ 0.19
RYDENQ9NUL5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 AL512637.1-201ENST00000439523 1231 ntBASIC16.26■□□□□ 0.19
RYDENQ9NUL5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RYDENQ9NUL5 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.26■□□□□ 0.19
RYDENQ9NUL5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RYDENQ9NUL5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RYDENQ9NUL5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RYDENQ9NUL5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RYDENQ9NUL5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RYDENQ9NUL5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RYDENQ9NUL5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RYDENQ9NUL5 RPS2P28-201ENST00000314255 741 ntBASIC16.25■□□□□ 0.19
RYDENQ9NUL5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RYDENQ9NUL5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RYDENQ9NUL5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms