Protein–RNA interactions for Protein: Q9D5U5

Pudp, Pseudouridine-5'-phosphatase, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PudpQ9D5U5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PudpQ9D5U5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Gm13418-201ENSMUST00000119097 944 ntBASIC14.32□□□□□ -0.12
PudpQ9D5U5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.32□□□□□ -0.12
PudpQ9D5U5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PudpQ9D5U5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.31□□□□□ -0.12
PudpQ9D5U5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.31□□□□□ -0.12
PudpQ9D5U5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Gm18622-201ENSMUST00000219361 595 ntBASIC14.31□□□□□ -0.12
PudpQ9D5U5 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.31□□□□□ -0.12
PudpQ9D5U5 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.31□□□□□ -0.12
PudpQ9D5U5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.31□□□□□ -0.12
PudpQ9D5U5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.31□□□□□ -0.12
PudpQ9D5U5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PudpQ9D5U5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.31□□□□□ -0.12
PudpQ9D5U5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 Gm25990-201ENSMUST00000102440 86 ntBASIC14.3□□□□□ -0.12
PudpQ9D5U5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PudpQ9D5U5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms