Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 FP475955.4-201ENST00000623131 1990 ntBASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN3Q9BTN0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 AC129492.6-201ENST00000611383 1305 ntBASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 SLC25A24-204ENST00000569674 2357 ntBASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 AC097637.2-201ENST00000624096 1997 ntBASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 ACTBP11-201ENST00000436287 1126 ntBASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 AL512343.1-201ENST00000605837 169 ntBASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LRFN3Q9BTN0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
LRFN3Q9BTN0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.52■□□□□ 0.39
LRFN3Q9BTN0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRFN3Q9BTN0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.52■□□□□ 0.39
LRFN3Q9BTN0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 COX5BP2-201ENST00000392354 334 ntBASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 AP005482.1-201ENST00000563722 1273 ntBASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 AC007375.3-201ENST00000600936 2314 ntBASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 AL049757.1-201ENST00000616842 1596 ntBASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 MIR6727-201ENST00000620702 65 ntBASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 COX11-210ENST00000639671 696 ntBASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRFN3Q9BTN0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms