Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smco3Q8BQM7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Mir770-201ENSMUST00000103252 94 ntBASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.2□□□□□ -0.46
Smco3Q8BQM7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco3Q8BQM7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.19□□□□□ -0.46
Smco3Q8BQM7 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco3Q8BQM7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco3Q8BQM7 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms