Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC31.42■■■□□ 2.62
SMARCA4P51532 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
SMARCA4P51532 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
SMARCA4P51532 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 SPDYE11-202ENST00000450699 704 ntBASIC31.42■■■□□ 2.62
SMARCA4P51532 AC005225.4-201ENST00000557330 545 ntBASIC31.42■■■□□ 2.62
SMARCA4P51532 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC31.42■■■□□ 2.62
SMARCA4P51532 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC31.42■■■□□ 2.62
SMARCA4P51532 SPDYE9P-201ENST00000570642 692 ntBASIC31.42■■■□□ 2.62
SMARCA4P51532 SPDYE10P-202ENST00000612005 668 ntBASIC31.42■■■□□ 2.62
SMARCA4P51532 SPDYE8P-202ENST00000612377 668 ntBASIC31.42■■■□□ 2.62
SMARCA4P51532 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA4P51532 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
SMARCA4P51532 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC31.41■■■□□ 2.62
SMARCA4P51532 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC31.41■■■□□ 2.62
SMARCA4P51532 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC31.41■■■□□ 2.62
SMARCA4P51532 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA4P51532 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC31.4■■■□□ 2.62
SMARCA4P51532 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC31.4■■■□□ 2.62
SMARCA4P51532 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCA4P51532 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC31.4■■■□□ 2.62
SMARCA4P51532 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCA4P51532 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCA4P51532 MYCLP1-201ENST00000372451 1075 ntBASIC31.4■■■□□ 2.62
SMARCA4P51532 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC31.4■■■□□ 2.62
SMARCA4P51532 RN7SL589P-201ENST00000481268 310 ntBASIC31.4■■■□□ 2.62
SMARCA4P51532 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCA4P51532 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
SMARCA4P51532 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC31.4■■■□□ 2.62
SMARCA4P51532 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA4P51532 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA4P51532 WRB-204ENST00000398753 699 ntTSL 3 BASIC31.39■■■□□ 2.62
SMARCA4P51532 FAM58DP-201ENST00000428076 619 ntBASIC31.39■■■□□ 2.62
SMARCA4P51532 AC069335.1-201ENST00000489972 472 ntBASIC31.39■■■□□ 2.62
SMARCA4P51532 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC31.39■■■□□ 2.62
SMARCA4P51532 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC31.39■■■□□ 2.62
SMARCA4P51532 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA4P51532 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC31.39■■■□□ 2.62
SMARCA4P51532 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC31.39■■■□□ 2.62
SMARCA4P51532 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC31.39■■■□□ 2.62
SMARCA4P51532 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA4P51532 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA4P51532 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
SMARCA4P51532 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA4P51532 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
SMARCA4P51532 AC005034.1-201ENST00000426657 489 ntBASIC31.38■■■□□ 2.61
SMARCA4P51532 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA4P51532 GATB-205ENST00000508611 605 ntTSL 2 BASIC31.38■■■□□ 2.61
SMARCA4P51532 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC31.38■■■□□ 2.61
SMARCA4P51532 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC31.38■■■□□ 2.61
SMARCA4P51532 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC31.38■■■□□ 2.61
SMARCA4P51532 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA4P51532 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA4P51532 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
SMARCA4P51532 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC31.38■■■□□ 2.61
SMARCA4P51532 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA4P51532 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
SMARCA4P51532 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA4P51532 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC31.38■■■□□ 2.61
SMARCA4P51532 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA4P51532 AC002056.1-201ENST00000395613 760 ntBASIC31.38■■■□□ 2.61
SMARCA4P51532 NABP1-203ENST00000409510 843 ntTSL 5 BASIC31.38■■■□□ 2.61
SMARCA4P51532 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC31.38■■■□□ 2.61
SMARCA4P51532 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC31.38■■■□□ 2.61
SMARCA4P51532 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC31.38■■■□□ 2.61
SMARCA4P51532 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC31.38■■■□□ 2.61
SMARCA4P51532 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC31.38■■■□□ 2.61
SMARCA4P51532 AL512356.2-201ENST00000546955 174 ntBASIC31.38■■■□□ 2.61
SMARCA4P51532 RN7SL204P-201ENST00000582831 262 ntBASIC31.38■■■□□ 2.61
SMARCA4P51532 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC31.38■■■□□ 2.61
SMARCA4P51532 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA4P51532 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA4P51532 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA4P51532 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
SMARCA4P51532 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA4P51532 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA4P51532 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA4P51532 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA4P51532 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC31.37■■■□□ 2.61
SMARCA4P51532 AC079140.1-201ENST00000508039 487 ntBASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms