Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.72■□□□□ 0.59
SOX1O00570 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.72■□□□□ 0.59
SOX1O00570 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.72■□□□□ 0.59
SOX1O00570 REXO1L6P-201ENST00000603433 1515 ntBASIC18.72■□□□□ 0.59
SOX1O00570 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.72■□□□□ 0.59
SOX1O00570 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 AL049757.1-201ENST00000616842 1596 ntBASIC18.72■□□□□ 0.59
SOX1O00570 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.72■□□□□ 0.59
SOX1O00570 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SOX1O00570 PI4KAP1-204ENST00000612579 1703 ntBASIC18.71■□□□□ 0.59
SOX1O00570 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.71■□□□□ 0.59
SOX1O00570 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SOX1O00570 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SOX1O00570 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.71■□□□□ 0.59
SOX1O00570 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.71■□□□□ 0.59
SOX1O00570 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX1O00570 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.71■□□□□ 0.59
SOX1O00570 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX1O00570 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SOX1O00570 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SOX1O00570 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.71■□□□□ 0.59
SOX1O00570 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
SOX1O00570 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.71■□□□□ 0.59
SOX1O00570 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.71■□□□□ 0.59
SOX1O00570 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.71■□□□□ 0.59
SOX1O00570 TMEM261P1-201ENST00000604899 340 ntBASIC18.71■□□□□ 0.59
SOX1O00570 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX1O00570 MIR6080-201ENST00000617359 66 ntBASIC18.71■□□□□ 0.59
SOX1O00570 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.71■□□□□ 0.59
SOX1O00570 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX1O00570 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX1O00570 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.71■□□□□ 0.59
SOX1O00570 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.71■□□□□ 0.59
SOX1O00570 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.71■□□□□ 0.59
SOX1O00570 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.71■□□□□ 0.59
SOX1O00570 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX1O00570 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SOX1O00570 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.71■□□□□ 0.59
SOX1O00570 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
SOX1O00570 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SOX1O00570 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SOX1O00570 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.7■□□□□ 0.58
SOX1O00570 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 TSSK5P-201ENST00000423978 907 ntBASIC18.7■□□□□ 0.58
SOX1O00570 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SOX1O00570 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SOX1O00570 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SOX1O00570 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SOX1O00570 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.7■□□□□ 0.58
SOX1O00570 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.7■□□□□ 0.58
SOX1O00570 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SOX1O00570 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SOX1O00570 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SOX1O00570 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.69■□□□□ 0.58
SOX1O00570 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.69■□□□□ 0.58
SOX1O00570 AC022210.1-201ENST00000449856 793 ntBASIC18.69■□□□□ 0.58
SOX1O00570 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.69■□□□□ 0.58
SOX1O00570 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.69■□□□□ 0.58
SOX1O00570 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.69■□□□□ 0.58
SOX1O00570 AC084121.4-201ENST00000641598 221 ntBASIC18.69■□□□□ 0.58
SOX1O00570 AF228730.8-201ENST00000642140 221 ntBASIC18.69■□□□□ 0.58
SOX1O00570 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SOX1O00570 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.69■□□□□ 0.58
SOX1O00570 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOX1O00570 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.69■□□□□ 0.58
SOX1O00570 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 AC100757.3-201ENST00000622361 1406 ntBASIC18.68■□□□□ 0.58
SOX1O00570 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOX1O00570 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms