Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 AC012618.2-201ENST00000428058 849 ntBASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 FAM201B-201ENST00000458407 597 ntBASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 MIR4651-201ENST00000582622 73 ntBASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 AC116562.4-202ENST00000641738 218 ntBASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CTNNBIP1Q9NSA3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 KRT18P29-201ENST00000397031 1267 ntBASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 AC026471.5-201ENST00000615068 467 ntBASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 AC113410.3-201ENST00000623366 203 ntBASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 AL049637.2-201ENST00000641778 930 ntBASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CTNNBIP1Q9NSA3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 UNC93B2-201ENST00000285383 730 ntBASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 UBE2SP1-201ENST00000450587 669 ntBASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 AC233702.5-201ENST00000584107 538 ntBASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.42□□□□□ -0.1
CTNNBIP1Q9NSA3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms