Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist3h2bbQ8CGP0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm10517-202ENSMUST00000192970 758 ntBASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist3h2bbQ8CGP0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist3h2bbQ8CGP0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist3h2bbQ8CGP0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist3h2bbQ8CGP0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hist3h2bbQ8CGP0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist3h2bbQ8CGP0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist3h2bbQ8CGP0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Hist3h2bbQ8CGP0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.21□□□□□ -0.61
Hist3h2bbQ8CGP0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist3h2bbQ8CGP0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms