Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM4P67936 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM4P67936 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TPM4P67936 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TPM4P67936 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
TPM4P67936 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
TPM4P67936 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.93■□□□□ 0.78
TPM4P67936 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM4P67936 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.93■□□□□ 0.78
TPM4P67936 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.93■□□□□ 0.78
TPM4P67936 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.93■□□□□ 0.78
TPM4P67936 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.93■□□□□ 0.78
TPM4P67936 LINC01451-201ENST00000623792 534 ntBASIC19.93■□□□□ 0.78
TPM4P67936 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.93■□□□□ 0.78
TPM4P67936 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 AC132938.6-201ENST00000623828 1655 ntBASIC19.93■□□□□ 0.78
TPM4P67936 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
TPM4P67936 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TPM4P67936 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM4P67936 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM4P67936 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TPM4P67936 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TPM4P67936 TSPY17P-201ENST00000450329 467 ntBASIC19.92■□□□□ 0.78
TPM4P67936 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM4P67936 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM4P67936 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.92■□□□□ 0.78
TPM4P67936 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM4P67936 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM4P67936 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TPM4P67936 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
TPM4P67936 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TPM4P67936 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TPM4P67936 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM4P67936 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM4P67936 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.91■□□□□ 0.78
TPM4P67936 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM4P67936 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TPM4P67936 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM4P67936 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 ID1-201ENST00000376105 1233 ntBASIC19.91■□□□□ 0.78
TPM4P67936 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TPM4P67936 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.91■□□□□ 0.78
TPM4P67936 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.91■□□□□ 0.78
TPM4P67936 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.91■□□□□ 0.78
TPM4P67936 AP003041.3-201ENST00000527151 707 ntBASIC19.91■□□□□ 0.78
TPM4P67936 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.91■□□□□ 0.78
TPM4P67936 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM4P67936 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM4P67936 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.91■□□□□ 0.78
TPM4P67936 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.91■□□□□ 0.78
TPM4P67936 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
TPM4P67936 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM4P67936 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms