Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Gm43767-201ENSMUST00000198933 381 ntBASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfrsf1aP25118 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Gm28659-201ENSMUST00000188013 759 ntBASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfrsf1aP25118 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.41□□□□□ -0.42
Tnfrsf1aP25118 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf1aP25118 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms