Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ly6c1P0CW02 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.4□□□□□ -0.42
Ly6c1P0CW02 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ly6c1P0CW02 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ly6c1P0CW02 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ly6c1P0CW02 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ly6c1P0CW02 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ly6c1P0CW02 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ly6c1P0CW02 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ly6c1P0CW02 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ly6c1P0CW02 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ly6c1P0CW02 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Ly6c1P0CW02 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Gm6973-201ENSMUST00000117080 721 ntBASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ly6c1P0CW02 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Gm26308-201ENSMUST00000157768 69 ntBASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Gm44335-201ENSMUST00000196879 141 ntBASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Gm44297-201ENSMUST00000198304 141 ntBASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Gm44346-201ENSMUST00000198851 141 ntBASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ly6c1P0CW02 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ly6c1P0CW02 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms