Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 AL513480.1-201ENST00000451731 511 ntBASIC27.36■■□□□ 1.97
ABCA8O94911 NMU-203ENST00000507338 658 ntTSL 3 BASIC27.36■■□□□ 1.97
ABCA8O94911 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC27.36■■□□□ 1.97
ABCA8O94911 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA8O94911 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC27.36■■□□□ 1.97
ABCA8O94911 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 HLA-J-202ENST00000469281 1241 ntBASIC27.35■■□□□ 1.97
ABCA8O94911 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 DUX4L27-201ENST00000554796 1261 ntBASIC27.35■■□□□ 1.97
ABCA8O94911 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC27.35■■□□□ 1.97
ABCA8O94911 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 AC026120.1-201ENST00000611536 926 ntBASIC27.35■■□□□ 1.97
ABCA8O94911 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC27.35■■□□□ 1.97
ABCA8O94911 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC27.35■■□□□ 1.97
ABCA8O94911 VPS29-207ENST00000549970 818 ntTSL 3 BASIC27.35■■□□□ 1.97
ABCA8O94911 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC27.35■■□□□ 1.97
ABCA8O94911 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA8O94911 PI4KAP1-204ENST00000612579 1703 ntBASIC27.34■■□□□ 1.97
ABCA8O94911 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC27.34■■□□□ 1.97
ABCA8O94911 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC27.34■■□□□ 1.97
ABCA8O94911 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA8O94911 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA8O94911 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA8O94911 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA8O94911 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA8O94911 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC27.34■■□□□ 1.97
ABCA8O94911 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC27.34■■□□□ 1.97
ABCA8O94911 INO80E-210ENST00000567705 880 ntTSL 3 BASIC27.34■■□□□ 1.97
ABCA8O94911 NAA60-208ENST00000570819 833 ntTSL 2 BASIC27.34■■□□□ 1.97
ABCA8O94911 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA8O94911 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA8O94911 AL035252.4-201ENST00000624174 288 ntBASIC27.34■■□□□ 1.97
ABCA8O94911 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA8O94911 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC27.34■■□□□ 1.97
ABCA8O94911 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC27.34■■□□□ 1.97
ABCA8O94911 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA8O94911 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA8O94911 BAD-202ENST00000394531 631 ntTSL 3 BASIC27.33■■□□□ 1.97
ABCA8O94911 THTPA-204ENST00000554970 569 ntTSL 4 BASIC27.33■■□□□ 1.97
ABCA8O94911 THTPA-206ENST00000556015 535 ntTSL 3 BASIC27.33■■□□□ 1.97
ABCA8O94911 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC27.33■■□□□ 1.97
ABCA8O94911 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA8O94911 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC27.33■■□□□ 1.97
ABCA8O94911 AP001059.3-201ENST00000619053 235 ntBASIC27.33■■□□□ 1.97
ABCA8O94911 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA8O94911 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA8O94911 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC27.33■■□□□ 1.97
ABCA8O94911 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC27.33■■□□□ 1.97
ABCA8O94911 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
ABCA8O94911 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
ABCA8O94911 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
ABCA8O94911 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA8O94911 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA8O94911 AC012645.4-201ENST00000610691 1061 ntBASIC27.32■■□□□ 1.96
ABCA8O94911 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC27.32■■□□□ 1.96
ABCA8O94911 HFE2-206ENST00000634927 506 ntTSL 4 BASIC27.32■■□□□ 1.96
ABCA8O94911 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA8O94911 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
ABCA8O94911 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA8O94911 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC27.32■■□□□ 1.96
ABCA8O94911 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC27.32■■□□□ 1.96
ABCA8O94911 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA8O94911 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA8O94911 MYCLP1-201ENST00000372451 1075 ntBASIC27.31■■□□□ 1.96
ABCA8O94911 AC244107.1-201ENST00000442033 332 ntBASIC27.31■■□□□ 1.96
ABCA8O94911 CNN2P2-201ENST00000443536 909 ntBASIC27.31■■□□□ 1.96
ABCA8O94911 CNN2P3-201ENST00000450201 906 ntBASIC27.31■■□□□ 1.96
ABCA8O94911 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC27.31■■□□□ 1.96
ABCA8O94911 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
ABCA8O94911 PUDP-206ENST00000540122 825 ntTSL 2 BASIC27.31■■□□□ 1.96
ABCA8O94911 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC27.31■■□□□ 1.96
ABCA8O94911 AL136317.3-201ENST00000618497 906 ntBASIC27.31■■□□□ 1.96
ABCA8O94911 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA8O94911 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
ABCA8O94911 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
ABCA8O94911 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC27.31■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms