Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMAD6O43541 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.92■□□□□ 0.46
SMAD6O43541 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 PMPCAP1-201ENST00000508114 1576 ntBASIC17.92■□□□□ 0.46
SMAD6O43541 AC012317.2-201ENST00000623305 2251 ntBASIC17.92■□□□□ 0.46
SMAD6O43541 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.92■□□□□ 0.46
SMAD6O43541 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.92■□□□□ 0.46
SMAD6O43541 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMAD6O43541 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.92■□□□□ 0.46
SMAD6O43541 AC103564.2-201ENST00000432853 1299 ntBASIC17.92■□□□□ 0.46
SMAD6O43541 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.92■□□□□ 0.46
SMAD6O43541 SART3-203ENST00000546611 1184 ntBASIC17.92■□□□□ 0.46
SMAD6O43541 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.92■□□□□ 0.46
SMAD6O43541 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.92■□□□□ 0.46
SMAD6O43541 AC019129.2-201ENST00000609837 1235 ntBASIC17.92■□□□□ 0.46
SMAD6O43541 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.92■□□□□ 0.46
SMAD6O43541 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMAD6O43541 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
SMAD6O43541 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.92■□□□□ 0.46
SMAD6O43541 BX276092.7-203ENST00000637198 1536 ntBASIC17.92■□□□□ 0.46
SMAD6O43541 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SMAD6O43541 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.91■□□□□ 0.46
SMAD6O43541 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.91■□□□□ 0.46
SMAD6O43541 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.91■□□□□ 0.46
SMAD6O43541 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMAD6O43541 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.91■□□□□ 0.46
SMAD6O43541 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.91■□□□□ 0.46
SMAD6O43541 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.91■□□□□ 0.46
SMAD6O43541 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.91■□□□□ 0.46
SMAD6O43541 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.91■□□□□ 0.46
SMAD6O43541 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.91■□□□□ 0.46
SMAD6O43541 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.91■□□□□ 0.46
SMAD6O43541 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.91■□□□□ 0.46
SMAD6O43541 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
SMAD6O43541 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.91■□□□□ 0.46
SMAD6O43541 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SMAD6O43541 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.91■□□□□ 0.46
SMAD6O43541 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMAD6O43541 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.91■□□□□ 0.46
SMAD6O43541 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SMAD6O43541 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.9■□□□□ 0.46
SMAD6O43541 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SMAD6O43541 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.9■□□□□ 0.46
SMAD6O43541 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.9■□□□□ 0.46
SMAD6O43541 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SMAD6O43541 NKAPP1-205ENST00000585790 367 ntBASIC17.9■□□□□ 0.46
SMAD6O43541 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.9■□□□□ 0.46
SMAD6O43541 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.9■□□□□ 0.46
SMAD6O43541 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.9■□□□□ 0.46
SMAD6O43541 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.9■□□□□ 0.46
SMAD6O43541 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SMAD6O43541 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMAD6O43541 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMAD6O43541 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.89■□□□□ 0.46
SMAD6O43541 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMAD6O43541 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMAD6O43541 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.89■□□□□ 0.46
SMAD6O43541 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMAD6O43541 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SMAD6O43541 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMAD6O43541 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms