Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SLC28A1O00337 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC28A1O00337 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
SLC28A1O00337 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC28A1O00337 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 FAM8A6P-201ENST00000407496 1135 ntBASIC17.12■□□□□ 0.33
SLC28A1O00337 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 HLA-F-220ENST00000434407 884 ntBASIC17.12■□□□□ 0.33
SLC28A1O00337 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC28A1O00337 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC28A1O00337 AL441883.1-201ENST00000566170 1045 ntBASIC17.12■□□□□ 0.33
SLC28A1O00337 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SLC28A1O00337 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC28A1O00337 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A1O00337 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC28A1O00337 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC28A1O00337 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC28A1O00337 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC28A1O00337 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC28A1O00337 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC28A1O00337 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 STARP1-201ENST00000397973 869 ntBASIC17.11■□□□□ 0.33
SLC28A1O00337 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.11■□□□□ 0.33
SLC28A1O00337 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC28A1O00337 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC28A1O00337 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SLC28A1O00337 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC28A1O00337 AC010203.1-204ENST00000548782 407 ntBASIC17.11■□□□□ 0.33
SLC28A1O00337 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC28A1O00337 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC28A1O00337 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC28A1O00337 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC28A1O00337 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC28A1O00337 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC28A1O00337 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 BX276092.7-203ENST00000637198 1536 ntBASIC17.11■□□□□ 0.33
SLC28A1O00337 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A1O00337 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC28A1O00337 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC28A1O00337 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SLC28A1O00337 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC28A1O00337 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
SLC28A1O00337 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC28A1O00337 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC28A1O00337 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC28A1O00337 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC28A1O00337 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC28A1O00337 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 AC112698.1-201ENST00000510299 916 ntBASIC17.1■□□□□ 0.33
SLC28A1O00337 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC28A1O00337 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.1■□□□□ 0.33
SLC28A1O00337 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC28A1O00337 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC28A1O00337 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC28A1O00337 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC28A1O00337 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC28A1O00337 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms