Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.34■□□□□ 0.21
RPH3AQ9Y2J0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPH3AQ9Y2J0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.33■□□□□ 0.21
RPH3AQ9Y2J0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
RPH3AQ9Y2J0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RPH3AQ9Y2J0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPH3AQ9Y2J0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RPH3AQ9Y2J0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RPH3AQ9Y2J0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 RN7SL606P-201ENST00000472779 293 ntBASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 RN7SL510P-201ENST00000581311 263 ntBASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 AC009154.2-201ENST00000621177 724 ntBASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 AC093010.1-201ENST00000473625 1624 ntBASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPH3AQ9Y2J0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 DRAXINP1-201ENST00000437611 948 ntBASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 AC068472.1-201ENST00000474589 881 ntBASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPH3AQ9Y2J0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 KRT18P65-201ENST00000439811 1286 ntBASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 VENTXP7-201ENST00000475503 772 ntBASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms