Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 KRT18P57-201ENST00000443599 1254 ntBASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 COX11P1-201ENST00000489116 835 ntBASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LIN7CQ9NUP9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 TMPOP1-202ENST00000424642 1267 ntBASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 FAM210CP-201ENST00000445714 574 ntBASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 AC008687.5-201ENST00000593746 558 ntBASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 AL138688.1-201ENST00000624851 1594 ntBASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 AL024508.2-201ENST00000607749 1894 ntBASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 AC009053.2-201ENST00000563701 2365 ntBASIC14.8□□□□□ -0.04
LIN7CQ9NUP9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 AC012313.1-201ENST00000593393 3059 ntBASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIN7CQ9NUP9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms