Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL355312.1-201ENST00000407115 2176 ntBASIC18.96■□□□□ 0.63
CISHQ9NSE2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 REXO1L11P-201ENST00000620964 1927 ntBASIC18.96■□□□□ 0.63
CISHQ9NSE2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 MINOS1P3-201ENST00000457048 203 ntBASIC18.96■□□□□ 0.63
CISHQ9NSE2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 AC005332.8-201ENST00000622750 2735 ntBASIC18.96■□□□□ 0.63
CISHQ9NSE2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CISHQ9NSE2 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CISHQ9NSE2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 AC009533.2-201ENST00000543664 586 ntBASIC18.95■□□□□ 0.62
CISHQ9NSE2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 BNIP3P18-201ENST00000593976 575 ntBASIC18.95■□□□□ 0.62
CISHQ9NSE2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CISHQ9NSE2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.95■□□□□ 0.62
CISHQ9NSE2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 COX5BP2-201ENST00000392354 334 ntBASIC18.94■□□□□ 0.62
CISHQ9NSE2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CISHQ9NSE2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CISHQ9NSE2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CISHQ9NSE2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms