Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 IGHV3-62-201ENST00000520057 340 ntBASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 AC027369.6-201ENST00000525520 931 ntBASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 AL512408.1-201ENST00000569378 2000 ntBASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 PI4KAP1-204ENST00000612579 1703 ntBASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 UXT-AS1-201ENST00000590504 1525 ntBASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 RN7SL752P-201ENST00000463779 287 ntBASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 API5-211ENST00000534695 560 ntTSL 5 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN3Q9BTN0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN3Q9BTN0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.58■□□□□ 0.41
LRFN3Q9BTN0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.58■□□□□ 0.41
LRFN3Q9BTN0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.58■□□□□ 0.41
LRFN3Q9BTN0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LRFN3Q9BTN0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.58■□□□□ 0.41
LRFN3Q9BTN0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN3Q9BTN0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 AKAP8P1-201ENST00000434743 1349 ntBASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 KLF4P1-201ENST00000412782 1185 ntBASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 AC104794.3-201ENST00000566840 1248 ntBASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 AC019129.2-201ENST00000609837 1235 ntBASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 ACTL9-202ENST00000612068 1252 ntBASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRFN3Q9BTN0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 MTMR9LP-203ENST00000426597 1545 ntBASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 AC007541.1-201ENST00000570282 1469 ntBASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 DGCR5-201ENST00000399539 862 ntBASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 AP006294.1-201ENST00000415407 339 ntBASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 AL353779.1-201ENST00000434793 351 ntBASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 AC140658.5-201ENST00000438532 169 ntBASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRFN3Q9BTN0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms