Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
SPG11Q96JI7 AC105339.1-204ENST00000636249 355 ntBASIC15.03■□□□□ -0
SPG11Q96JI7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SPG11Q96JI7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SPG11Q96JI7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPG11Q96JI7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SPG11Q96JI7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.02■□□□□ -0
SPG11Q96JI7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SPG11Q96JI7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.02■□□□□ -0
SPG11Q96JI7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.02■□□□□ -0
SPG11Q96JI7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
SPG11Q96JI7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.02■□□□□ -0
SPG11Q96JI7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.02■□□□□ -0
SPG11Q96JI7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.02■□□□□ -0
SPG11Q96JI7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPG11Q96JI7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPG11Q96JI7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
SPG11Q96JI7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
SPG11Q96JI7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPG11Q96JI7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SPG11Q96JI7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPG11Q96JI7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SPG11Q96JI7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SPG11Q96JI7 GK-202ENST00000378941 458 ntTSL 3 BASIC15.02□□□□□ -0.01
SPG11Q96JI7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPG11Q96JI7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.02□□□□□ -0.01
SPG11Q96JI7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.02□□□□□ -0.01
SPG11Q96JI7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
SPG11Q96JI7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPG11Q96JI7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPG11Q96JI7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.01□□□□□ -0.01
SPG11Q96JI7 AC015922.1-201ENST00000421102 1152 ntBASIC15.01□□□□□ -0.01
SPG11Q96JI7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 RHOQP3-201ENST00000437982 621 ntBASIC15.01□□□□□ -0.01
SPG11Q96JI7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPG11Q96JI7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.01□□□□□ -0.01
SPG11Q96JI7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
SPG11Q96JI7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15□□□□□ -0.01
SPG11Q96JI7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SPG11Q96JI7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SPG11Q96JI7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPG11Q96JI7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
SPG11Q96JI7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms