Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TRAF3IP1Q8TDR0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 AC004263.2-201ENST00000617183 678 ntBASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAF3IP1Q8TDR0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 TSPY12P-201ENST00000421279 868 ntBASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 AP003733.1-201ENST00000491725 852 ntBASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 AC006011.2-201ENST00000621313 1158 ntBASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP1Q8TDR0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 AC112907.2-201ENST00000448639 330 ntBASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP1Q8TDR0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP1Q8TDR0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms