Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 FITM1-202ENST00000559294 800 ntBASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 MIR4785-201ENST00000585005 73 ntBASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTCHD4Q6ZW05 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 MIR718-201ENST00000390190 70 ntBASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCHD4Q6ZW05 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 WWOX-216ENST00000569818 525 ntBASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCHD4Q6ZW05 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms