Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 LINC01451-201ENST00000623792 534 ntBASIC19.57■□□□□ 0.72
PMS1P54277 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PMS1P54277 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
PMS1P54277 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PMS1P54277 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PMS1P54277 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
PMS1P54277 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PMS1P54277 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PMS1P54277 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS1P54277 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.57■□□□□ 0.72
PMS1P54277 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
PMS1P54277 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.56■□□□□ 0.72
PMS1P54277 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.56■□□□□ 0.72
PMS1P54277 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.56■□□□□ 0.72
PMS1P54277 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.56■□□□□ 0.72
PMS1P54277 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.56■□□□□ 0.72
PMS1P54277 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.56■□□□□ 0.72
PMS1P54277 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.56■□□□□ 0.72
PMS1P54277 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.56■□□□□ 0.72
PMS1P54277 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
PMS1P54277 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
PMS1P54277 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PMS1P54277 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.56■□□□□ 0.72
PMS1P54277 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.56■□□□□ 0.72
PMS1P54277 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS1P54277 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.55■□□□□ 0.72
PMS1P54277 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.55■□□□□ 0.72
PMS1P54277 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.55■□□□□ 0.72
PMS1P54277 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PMS1P54277 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PMS1P54277 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.55■□□□□ 0.72
PMS1P54277 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.55■□□□□ 0.72
PMS1P54277 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.55■□□□□ 0.72
PMS1P54277 AC092647.4-201ENST00000457211 535 ntBASIC19.55■□□□□ 0.72
PMS1P54277 DUX4L26-201ENST00000489078 1255 ntBASIC19.55■□□□□ 0.72
PMS1P54277 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 AC022616.7-201ENST00000525383 220 ntBASIC19.55■□□□□ 0.72
PMS1P54277 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.55■□□□□ 0.72
PMS1P54277 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.55■□□□□ 0.72
PMS1P54277 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PMS1P54277 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PMS1P54277 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PMS1P54277 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
PMS1P54277 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.55■□□□□ 0.72
PMS1P54277 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS1P54277 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.54■□□□□ 0.72
PMS1P54277 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.54■□□□□ 0.72
PMS1P54277 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PMS1P54277 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS1P54277 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS1P54277 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS1P54277 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PMS1P54277 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.54■□□□□ 0.72
PMS1P54277 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PMS1P54277 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.54■□□□□ 0.72
PMS1P54277 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.54■□□□□ 0.72
PMS1P54277 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PMS1P54277 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.54■□□□□ 0.72
PMS1P54277 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PMS1P54277 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.54■□□□□ 0.72
PMS1P54277 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS1P54277 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS1P54277 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS1P54277 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
PMS1P54277 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PMS1P54277 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.54■□□□□ 0.72
PMS1P54277 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.54■□□□□ 0.72
PMS1P54277 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PMS1P54277 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PMS1P54277 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS1P54277 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms