Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Vps29Q9QZ88 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.32■■□□□ 1
Vps29Q9QZ88 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.32■■□□□ 1
Vps29Q9QZ88 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps29Q9QZ88 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.32■■□□□ 1
Vps29Q9QZ88 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps29Q9QZ88 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Vps29Q9QZ88 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps29Q9QZ88 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Vps29Q9QZ88 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vps29Q9QZ88 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps29Q9QZ88 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps29Q9QZ88 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vps29Q9QZ88 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps29Q9QZ88 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps29Q9QZ88 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps29Q9QZ88 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Vps29Q9QZ88 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps29Q9QZ88 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.28■■□□□ 1
Vps29Q9QZ88 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps29Q9QZ88 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Vps29Q9QZ88 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps29Q9QZ88 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Vps29Q9QZ88 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.27■■□□□ 1
Vps29Q9QZ88 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps29Q9QZ88 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps29Q9QZ88 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Vps29Q9QZ88 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vps29Q9QZ88 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.26■□□□□ 0.99
Vps29Q9QZ88 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps29Q9QZ88 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps29Q9QZ88 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.25■□□□□ 0.99
Vps29Q9QZ88 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps29Q9QZ88 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.25■□□□□ 0.99
Vps29Q9QZ88 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.25■□□□□ 0.99
Vps29Q9QZ88 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps29Q9QZ88 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps29Q9QZ88 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Vps29Q9QZ88 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Vps29Q9QZ88 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps29Q9QZ88 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.24■□□□□ 0.99
Vps29Q9QZ88 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.24■□□□□ 0.99
Vps29Q9QZ88 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps29Q9QZ88 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps29Q9QZ88 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps29Q9QZ88 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps29Q9QZ88 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps29Q9QZ88 Gm6311-201ENSMUST00000073790 878 ntBASIC21.22■□□□□ 0.99
Vps29Q9QZ88 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps29Q9QZ88 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Vps29Q9QZ88 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps29Q9QZ88 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.21■□□□□ 0.99
Vps29Q9QZ88 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.21■□□□□ 0.99
Vps29Q9QZ88 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps29Q9QZ88 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps29Q9QZ88 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps29Q9QZ88 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps29Q9QZ88 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.2■□□□□ 0.98
Vps29Q9QZ88 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Vps29Q9QZ88 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps29Q9QZ88 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Vps29Q9QZ88 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.19■□□□□ 0.98
Vps29Q9QZ88 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps29Q9QZ88 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps29Q9QZ88 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.19■□□□□ 0.98
Vps29Q9QZ88 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.19■□□□□ 0.98
Vps29Q9QZ88 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vps29Q9QZ88 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vps29Q9QZ88 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps29Q9QZ88 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps29Q9QZ88 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps29Q9QZ88 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps29Q9QZ88 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps29Q9QZ88 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps29Q9QZ88 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps29Q9QZ88 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Vps29Q9QZ88 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Vps29Q9QZ88 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps29Q9QZ88 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.17■□□□□ 0.98
Vps29Q9QZ88 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.17■□□□□ 0.98
Vps29Q9QZ88 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps29Q9QZ88 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps29Q9QZ88 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Vps29Q9QZ88 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps29Q9QZ88 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps29Q9QZ88 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Vps29Q9QZ88 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps29Q9QZ88 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.15■□□□□ 0.98
Vps29Q9QZ88 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps29Q9QZ88 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vps29Q9QZ88 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vps29Q9QZ88 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps29Q9QZ88 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Vps29Q9QZ88 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.14■□□□□ 0.97
Vps29Q9QZ88 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vps29Q9QZ88 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps29Q9QZ88 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps29Q9QZ88 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps29Q9QZ88 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps29Q9QZ88 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms