Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1Q9CQ70 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.2■□□□□ 0.5
H2afb1Q9CQ70 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.2■□□□□ 0.5
H2afb1Q9CQ70 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.19■□□□□ 0.5
H2afb1Q9CQ70 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1Q9CQ70 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1Q9CQ70 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1Q9CQ70 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1Q9CQ70 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1Q9CQ70 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1Q9CQ70 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1Q9CQ70 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
H2afb1Q9CQ70 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1Q9CQ70 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.16■□□□□ 0.5
H2afb1Q9CQ70 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1Q9CQ70 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
H2afb1Q9CQ70 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.16■□□□□ 0.5
H2afb1Q9CQ70 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1Q9CQ70 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1Q9CQ70 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.15■□□□□ 0.5
H2afb1Q9CQ70 Gm45364-201ENSMUST00000210883 159 ntBASIC18.15■□□□□ 0.5
H2afb1Q9CQ70 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb1Q9CQ70 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
H2afb1Q9CQ70 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb1Q9CQ70 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb1Q9CQ70 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.15■□□□□ 0.5
H2afb1Q9CQ70 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
H2afb1Q9CQ70 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
H2afb1Q9CQ70 Terc-201ENSMUST00000082862 423 ntBASIC18.14■□□□□ 0.49
H2afb1Q9CQ70 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1Q9CQ70 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
H2afb1Q9CQ70 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1Q9CQ70 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1Q9CQ70 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1Q9CQ70 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1Q9CQ70 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1Q9CQ70 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1Q9CQ70 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1Q9CQ70 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1Q9CQ70 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1Q9CQ70 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1Q9CQ70 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1Q9CQ70 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1Q9CQ70 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.1■□□□□ 0.49
H2afb1Q9CQ70 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
H2afb1Q9CQ70 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb1Q9CQ70 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb1Q9CQ70 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
H2afb1Q9CQ70 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb1Q9CQ70 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
H2afb1Q9CQ70 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb1Q9CQ70 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.09■□□□□ 0.49
H2afb1Q9CQ70 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2afb1Q9CQ70 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2afb1Q9CQ70 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.08■□□□□ 0.48
H2afb1Q9CQ70 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afb1Q9CQ70 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afb1Q9CQ70 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
H2afb1Q9CQ70 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1Q9CQ70 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H2afb1Q9CQ70 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms