Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.56■■□□□ 1.04
Trim16Q99PP9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim16Q99PP9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim16Q99PP9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim16Q99PP9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim16Q99PP9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim16Q99PP9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim16Q99PP9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Trim16Q99PP9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim16Q99PP9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.55■■□□□ 1.04
Trim16Q99PP9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim16Q99PP9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim16Q99PP9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Trim16Q99PP9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim16Q99PP9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim16Q99PP9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.54■■□□□ 1.04
Trim16Q99PP9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim16Q99PP9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim16Q99PP9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim16Q99PP9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim16Q99PP9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim16Q99PP9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim16Q99PP9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim16Q99PP9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim16Q99PP9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim16Q99PP9 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.53■■□□□ 1.04
Trim16Q99PP9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim16Q99PP9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim16Q99PP9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim16Q99PP9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim16Q99PP9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Trim16Q99PP9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim16Q99PP9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim16Q99PP9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim16Q99PP9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim16Q99PP9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Trim16Q99PP9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim16Q99PP9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trim16Q99PP9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim16Q99PP9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim16Q99PP9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim16Q99PP9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim16Q99PP9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim16Q99PP9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trim16Q99PP9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trim16Q99PP9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim16Q99PP9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim16Q99PP9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim16Q99PP9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim16Q99PP9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim16Q99PP9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim16Q99PP9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim16Q99PP9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim16Q99PP9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim16Q99PP9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trim16Q99PP9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Trim16Q99PP9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim16Q99PP9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim16Q99PP9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim16Q99PP9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim16Q99PP9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim16Q99PP9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim16Q99PP9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.46■■□□□ 1.03
Trim16Q99PP9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim16Q99PP9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim16Q99PP9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Trim16Q99PP9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Trim16Q99PP9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.45■■□□□ 1.02
Trim16Q99PP9 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.45■■□□□ 1.02
Trim16Q99PP9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim16Q99PP9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim16Q99PP9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim16Q99PP9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.45■■□□□ 1.02
Trim16Q99PP9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim16Q99PP9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim16Q99PP9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim16Q99PP9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim16Q99PP9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.44■■□□□ 1.02
Trim16Q99PP9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Trim16Q99PP9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trim16Q99PP9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim16Q99PP9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Trim16Q99PP9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim16Q99PP9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim16Q99PP9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim16Q99PP9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim16Q99PP9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim16Q99PP9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim16Q99PP9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim16Q99PP9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim16Q99PP9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim16Q99PP9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim16Q99PP9 Gm11175-201ENSMUST00000116172 543 ntBASIC21.41■■□□□ 1.02
Trim16Q99PP9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim16Q99PP9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim16Q99PP9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim16Q99PP9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim16Q99PP9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim16Q99PP9 Scarna2-201ENSMUST00000157560 414 ntBASIC21.4■■□□□ 1.02
Trim16Q99PP9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms