Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdca3Q99M54 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.55■□□□□ 0.88
Cdca3Q99M54 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdca3Q99M54 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdca3Q99M54 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.54■□□□□ 0.88
Cdca3Q99M54 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdca3Q99M54 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdca3Q99M54 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdca3Q99M54 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdca3Q99M54 Gm22567-201ENSMUST00000175542 342 ntBASIC20.52■□□□□ 0.88
Cdca3Q99M54 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdca3Q99M54 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdca3Q99M54 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdca3Q99M54 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cdca3Q99M54 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdca3Q99M54 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdca3Q99M54 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.49■□□□□ 0.87
Cdca3Q99M54 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.48■□□□□ 0.87
Cdca3Q99M54 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cdca3Q99M54 Gm37136-201ENSMUST00000194368 194 ntBASIC20.47■□□□□ 0.87
Cdca3Q99M54 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdca3Q99M54 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdca3Q99M54 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdca3Q99M54 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cdca3Q99M54 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.45■□□□□ 0.86
Cdca3Q99M54 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdca3Q99M54 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.45■□□□□ 0.86
Cdca3Q99M54 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdca3Q99M54 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cdca3Q99M54 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdca3Q99M54 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdca3Q99M54 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdca3Q99M54 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.43■□□□□ 0.86
Cdca3Q99M54 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdca3Q99M54 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cdca3Q99M54 Gm5812-201ENSMUST00000061073 957 ntBASIC20.43■□□□□ 0.86
Cdca3Q99M54 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdca3Q99M54 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdca3Q99M54 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdca3Q99M54 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.39■□□□□ 0.85
Cdca3Q99M54 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdca3Q99M54 Gm10420-201ENSMUST00000121713 882 ntBASIC20.38■□□□□ 0.85
Cdca3Q99M54 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdca3Q99M54 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Cdca3Q99M54 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.37■□□□□ 0.85
Cdca3Q99M54 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms