Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC28,86■■■□□ 2,21
Abca3Q8R420 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC28,86■■■□□ 2,21
Abca3Q8R420 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28,85■■■□□ 2,21
Abca3Q8R420 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC28,85■■■□□ 2,21
Abca3Q8R420 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC28,85■■■□□ 2,21
Abca3Q8R420 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC28,85■■■□□ 2,21
Abca3Q8R420 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC28,85■■■□□ 2,21
Abca3Q8R420 Gm42501-201ENSMUST00000200220 1026 ntBASIC28,85■■■□□ 2,21
Abca3Q8R420 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC28,85■■■□□ 2,21
Abca3Q8R420 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC28,84■■■□□ 2,21
Abca3Q8R420 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28,84■■■□□ 2,21
Abca3Q8R420 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28,83■■■□□ 2,21
Abca3Q8R420 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC28,83■■■□□ 2,21
Abca3Q8R420 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28,82■■■□□ 2,2
Abca3Q8R420 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28,82■■■□□ 2,2
Abca3Q8R420 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC28,82■■■□□ 2,2
Abca3Q8R420 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC28,81■■■□□ 2,2
Abca3Q8R420 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Abca3Q8R420 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC28,8■■■□□ 2,2
Abca3Q8R420 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Abca3Q8R420 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Abca3Q8R420 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Abca3Q8R420 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28,8■■■□□ 2,2
Abca3Q8R420 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC28,8■■■□□ 2,2
Abca3Q8R420 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Abca3Q8R420 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Abca3Q8R420 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Abca3Q8R420 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC28,78■■■□□ 2,2
Abca3Q8R420 Fezf2-202ENSMUST00000224023 1917 ntBASIC28,78■■■□□ 2,2
Abca3Q8R420 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC28,78■■■□□ 2,2
Abca3Q8R420 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC28,78■■■□□ 2,2
Abca3Q8R420 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC28,77■■■□□ 2,2
Abca3Q8R420 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC28,77■■■□□ 2,2
Abca3Q8R420 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC28,77■■■□□ 2,2
Abca3Q8R420 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC28,77■■■□□ 2,2
Abca3Q8R420 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
Abca3Q8R420 Gm10232-201ENSMUST00000089221 720 ntBASIC28,77■■■□□ 2,2
Abca3Q8R420 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28,76■■■□□ 2,2
Abca3Q8R420 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC28,75■■■□□ 2,19
Abca3Q8R420 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC28,74■■■□□ 2,19
Abca3Q8R420 AC117769.4-201ENSMUST00000225679 685 ntBASIC28,74■■■□□ 2,19
Abca3Q8R420 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Abca3Q8R420 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC28,74■■■□□ 2,19
Abca3Q8R420 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Abca3Q8R420 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Abca3Q8R420 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC28,73■■■□□ 2,19
Abca3Q8R420 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28,73■■■□□ 2,19
Abca3Q8R420 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC28,73■■■□□ 2,19
Abca3Q8R420 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC28,73■■■□□ 2,19
Abca3Q8R420 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Abca3Q8R420 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Abca3Q8R420 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Abca3Q8R420 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC28,71■■■□□ 2,19
Abca3Q8R420 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Abca3Q8R420 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Abca3Q8R420 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28,7■■■□□ 2,19
Abca3Q8R420 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,18
Abca3Q8R420 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,18
Abca3Q8R420 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC28,69■■■□□ 2,18
Abca3Q8R420 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC28,69■■■□□ 2,18
Abca3Q8R420 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28,69■■■□□ 2,18
Abca3Q8R420 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC28,69■■■□□ 2,18
Abca3Q8R420 Gm5131-201ENSMUST00000212776 1238 ntBASIC28,69■■■□□ 2,18
Abca3Q8R420 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC28,69■■■□□ 2,18
Abca3Q8R420 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
Abca3Q8R420 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
Abca3Q8R420 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
Abca3Q8R420 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC28,68■■■□□ 2,18
Abca3Q8R420 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28,68■■■□□ 2,18
Abca3Q8R420 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28,67■■■□□ 2,18
Abca3Q8R420 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Abca3Q8R420 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28,67■■■□□ 2,18
Abca3Q8R420 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC28,66■■■□□ 2,18
Abca3Q8R420 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC28,66■■■□□ 2,18
Abca3Q8R420 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC28,66■■■□□ 2,18
Abca3Q8R420 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Abca3Q8R420 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Abca3Q8R420 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28,66■■■□□ 2,18
Abca3Q8R420 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC28,66■■■□□ 2,18
Abca3Q8R420 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC28,66■■■□□ 2,18
Abca3Q8R420 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Abca3Q8R420 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC28,65■■■□□ 2,18
Abca3Q8R420 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Abca3Q8R420 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28,64■■■□□ 2,18
Abca3Q8R420 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC28,64■■■□□ 2,18
Abca3Q8R420 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28,64■■■□□ 2,18
Abca3Q8R420 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28,64■■■□□ 2,17
Abca3Q8R420 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC28,64■■■□□ 2,17
Abca3Q8R420 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC28,63■■■□□ 2,17
Abca3Q8R420 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Abca3Q8R420 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC28,63■■■□□ 2,17
Abca3Q8R420 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28,63■■■□□ 2,17
Abca3Q8R420 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Abca3Q8R420 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Abca3Q8R420 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC28,62■■■□□ 2,17
Abca3Q8R420 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Abca3Q8R420 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC28,62■■■□□ 2,17
Abca3Q8R420 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Abca3Q8R420 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC28,62■■■□□ 2,17
Abca3Q8R420 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC28,62■■■□□ 2,17
Retrieved 100 of 76,532 protein–RNA pairs in 49,4 ms