Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tsen54Q8C2A2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tsen54Q8C2A2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tsen54Q8C2A2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tsen54Q8C2A2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tsen54Q8C2A2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.55■□□□□ 0.56
Tsen54Q8C2A2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Tsen54Q8C2A2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tsen54Q8C2A2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tsen54Q8C2A2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tsen54Q8C2A2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.55■□□□□ 0.56
Tsen54Q8C2A2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tsen54Q8C2A2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Tsen54Q8C2A2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tsen54Q8C2A2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tsen54Q8C2A2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tsen54Q8C2A2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tsen54Q8C2A2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tsen54Q8C2A2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Tsen54Q8C2A2 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.54■□□□□ 0.56
Tsen54Q8C2A2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tsen54Q8C2A2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tsen54Q8C2A2 Notumos-201ENSMUST00000151998 2659 ntBASIC18.53■□□□□ 0.56
Tsen54Q8C2A2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tsen54Q8C2A2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tsen54Q8C2A2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tsen54Q8C2A2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tsen54Q8C2A2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tsen54Q8C2A2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tsen54Q8C2A2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tsen54Q8C2A2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tsen54Q8C2A2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tsen54Q8C2A2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tsen54Q8C2A2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tsen54Q8C2A2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Tsen54Q8C2A2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tsen54Q8C2A2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tsen54Q8C2A2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tsen54Q8C2A2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.5■□□□□ 0.55
Tsen54Q8C2A2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tsen54Q8C2A2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tsen54Q8C2A2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tsen54Q8C2A2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tsen54Q8C2A2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tsen54Q8C2A2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Tsen54Q8C2A2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tsen54Q8C2A2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tsen54Q8C2A2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tsen54Q8C2A2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Tsen54Q8C2A2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tsen54Q8C2A2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tsen54Q8C2A2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tsen54Q8C2A2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Tsen54Q8C2A2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tsen54Q8C2A2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tsen54Q8C2A2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tsen54Q8C2A2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tsen54Q8C2A2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tsen54Q8C2A2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tsen54Q8C2A2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tsen54Q8C2A2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tsen54Q8C2A2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tsen54Q8C2A2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tsen54Q8C2A2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tsen54Q8C2A2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tsen54Q8C2A2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.46■□□□□ 0.55
Tsen54Q8C2A2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Tsen54Q8C2A2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tsen54Q8C2A2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.46■□□□□ 0.55
Tsen54Q8C2A2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tsen54Q8C2A2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tsen54Q8C2A2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tsen54Q8C2A2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tsen54Q8C2A2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tsen54Q8C2A2 Gm6821-201ENSMUST00000107540 542 ntBASIC18.45■□□□□ 0.54
Tsen54Q8C2A2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tsen54Q8C2A2 Nkain2-201ENSMUST00000092602 558 ntBASIC18.45■□□□□ 0.54
Tsen54Q8C2A2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tsen54Q8C2A2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tsen54Q8C2A2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tsen54Q8C2A2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tsen54Q8C2A2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tsen54Q8C2A2 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.44■□□□□ 0.54
Tsen54Q8C2A2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.44■□□□□ 0.54
Tsen54Q8C2A2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tsen54Q8C2A2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tsen54Q8C2A2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tsen54Q8C2A2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Tsen54Q8C2A2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Tsen54Q8C2A2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Tsen54Q8C2A2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tsen54Q8C2A2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tsen54Q8C2A2 Gm8503-201ENSMUST00000118131 455 ntBASIC18.42■□□□□ 0.54
Tsen54Q8C2A2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tsen54Q8C2A2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tsen54Q8C2A2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tsen54Q8C2A2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tsen54Q8C2A2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tsen54Q8C2A2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tsen54Q8C2A2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms