Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.79■□□□□ 0.92
Cpne1Q8C166 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne1Q8C166 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne1Q8C166 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne1Q8C166 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne1Q8C166 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne1Q8C166 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne1Q8C166 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne1Q8C166 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne1Q8C166 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne1Q8C166 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.76■□□□□ 0.91
Cpne1Q8C166 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne1Q8C166 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne1Q8C166 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne1Q8C166 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.76■□□□□ 0.91
Cpne1Q8C166 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Cpne1Q8C166 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne1Q8C166 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cpne1Q8C166 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne1Q8C166 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne1Q8C166 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.75■□□□□ 0.91
Cpne1Q8C166 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cpne1Q8C166 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne1Q8C166 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.75■□□□□ 0.91
Cpne1Q8C166 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne1Q8C166 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne1Q8C166 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne1Q8C166 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne1Q8C166 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne1Q8C166 Mir6538-201ENSMUST00000183713 110 ntBASIC20.74■□□□□ 0.91
Cpne1Q8C166 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.74■□□□□ 0.91
Cpne1Q8C166 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne1Q8C166 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cpne1Q8C166 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne1Q8C166 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne1Q8C166 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne1Q8C166 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cpne1Q8C166 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpne1Q8C166 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.72■□□□□ 0.91
Cpne1Q8C166 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne1Q8C166 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne1Q8C166 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne1Q8C166 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne1Q8C166 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.71■□□□□ 0.91
Cpne1Q8C166 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.71■□□□□ 0.91
Cpne1Q8C166 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne1Q8C166 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne1Q8C166 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne1Q8C166 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.7■□□□□ 0.91
Cpne1Q8C166 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne1Q8C166 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne1Q8C166 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne1Q8C166 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cpne1Q8C166 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne1Q8C166 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne1Q8C166 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne1Q8C166 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne1Q8C166 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.69■□□□□ 0.9
Cpne1Q8C166 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.68■□□□□ 0.9
Cpne1Q8C166 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.68■□□□□ 0.9
Cpne1Q8C166 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne1Q8C166 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne1Q8C166 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne1Q8C166 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne1Q8C166 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne1Q8C166 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne1Q8C166 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne1Q8C166 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne1Q8C166 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cpne1Q8C166 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne1Q8C166 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.66■□□□□ 0.9
Cpne1Q8C166 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne1Q8C166 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne1Q8C166 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cpne1Q8C166 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.65■□□□□ 0.9
Cpne1Q8C166 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne1Q8C166 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.65■□□□□ 0.9
Cpne1Q8C166 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpne1Q8C166 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpne1Q8C166 Gm27502-201ENSMUST00000183495 199 ntBASIC20.64■□□□□ 0.89
Cpne1Q8C166 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.64■□□□□ 0.89
Cpne1Q8C166 Gm44428-201ENSMUST00000204474 874 ntBASIC20.64■□□□□ 0.89
Cpne1Q8C166 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpne1Q8C166 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.64■□□□□ 0.89
Cpne1Q8C166 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne1Q8C166 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.63■□□□□ 0.89
Cpne1Q8C166 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cpne1Q8C166 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne1Q8C166 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne1Q8C166 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne1Q8C166 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.62■□□□□ 0.89
Cpne1Q8C166 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne1Q8C166 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne1Q8C166 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne1Q8C166 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cpne1Q8C166 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne1Q8C166 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne1Q8C166 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne1Q8C166 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.61■□□□□ 0.89
Cpne1Q8C166 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms