Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Trim50Q810I2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim50Q810I2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim50Q810I2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.68■■□□□ 1.06
Trim50Q810I2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim50Q810I2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim50Q810I2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim50Q810I2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim50Q810I2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim50Q810I2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim50Q810I2 Gm16437-201ENSMUST00000025669 507 ntBASIC21.66■■□□□ 1.06
Trim50Q810I2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim50Q810I2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trim50Q810I2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim50Q810I2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim50Q810I2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim50Q810I2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim50Q810I2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim50Q810I2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim50Q810I2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim50Q810I2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.65■■□□□ 1.06
Trim50Q810I2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim50Q810I2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim50Q810I2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim50Q810I2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.65■■□□□ 1.06
Trim50Q810I2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim50Q810I2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.64■■□□□ 1.06
Trim50Q810I2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim50Q810I2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim50Q810I2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim50Q810I2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim50Q810I2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim50Q810I2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim50Q810I2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim50Q810I2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Trim50Q810I2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim50Q810I2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim50Q810I2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim50Q810I2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim50Q810I2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.63■■□□□ 1.05
Trim50Q810I2 Gm11175-201ENSMUST00000116172 543 ntBASIC21.63■■□□□ 1.05
Trim50Q810I2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim50Q810I2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.62■■□□□ 1.05
Trim50Q810I2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim50Q810I2 Gm11687-201ENSMUST00000118911 886 ntBASIC21.62■■□□□ 1.05
Trim50Q810I2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.62■■□□□ 1.05
Trim50Q810I2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim50Q810I2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Trim50Q810I2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim50Q810I2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim50Q810I2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim50Q810I2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim50Q810I2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim50Q810I2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim50Q810I2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim50Q810I2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim50Q810I2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.59■■□□□ 1.05
Trim50Q810I2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim50Q810I2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim50Q810I2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim50Q810I2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Trim50Q810I2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim50Q810I2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Trim50Q810I2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim50Q810I2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim50Q810I2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.57■■□□□ 1.04
Trim50Q810I2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.56■■□□□ 1.04
Trim50Q810I2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim50Q810I2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim50Q810I2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim50Q810I2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim50Q810I2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim50Q810I2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim50Q810I2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.55■■□□□ 1.04
Trim50Q810I2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim50Q810I2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim50Q810I2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim50Q810I2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim50Q810I2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim50Q810I2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Trim50Q810I2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim50Q810I2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Trim50Q810I2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim50Q810I2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.53■■□□□ 1.04
Trim50Q810I2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim50Q810I2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim50Q810I2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim50Q810I2 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.52■■□□□ 1.04
Trim50Q810I2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim50Q810I2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim50Q810I2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim50Q810I2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim50Q810I2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trim50Q810I2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trim50Q810I2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim50Q810I2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim50Q810I2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim50Q810I2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim50Q810I2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim50Q810I2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms