Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.37■■□□□ 1.49
Sh3tc2Q80VA5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sh3tc2Q80VA5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.36■■□□□ 1.49
Sh3tc2Q80VA5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Sh3tc2Q80VA5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3tc2Q80VA5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.35■■□□□ 1.49
Sh3tc2Q80VA5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.35■■□□□ 1.49
Sh3tc2Q80VA5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.34■■□□□ 1.49
Sh3tc2Q80VA5 Gm14117-201ENSMUST00000122417 843 ntBASIC24.34■■□□□ 1.49
Sh3tc2Q80VA5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sh3tc2Q80VA5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sh3tc2Q80VA5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sh3tc2Q80VA5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
Sh3tc2Q80VA5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.48
Sh3tc2Q80VA5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
Sh3tc2Q80VA5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Sh3tc2Q80VA5 Gm45102-201ENSMUST00000207427 857 ntBASIC24.32■■□□□ 1.48
Sh3tc2Q80VA5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Sh3tc2Q80VA5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
Sh3tc2Q80VA5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3tc2Q80VA5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Sh3tc2Q80VA5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3tc2Q80VA5 Gm45444-201ENSMUST00000211394 898 ntBASIC24.31■■□□□ 1.48
Sh3tc2Q80VA5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3tc2Q80VA5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3tc2Q80VA5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3tc2Q80VA5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sh3tc2Q80VA5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.3■■□□□ 1.48
Sh3tc2Q80VA5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Sh3tc2Q80VA5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sh3tc2Q80VA5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sh3tc2Q80VA5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.28■■□□□ 1.48
Sh3tc2Q80VA5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sh3tc2Q80VA5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sh3tc2Q80VA5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sh3tc2Q80VA5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sh3tc2Q80VA5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sh3tc2Q80VA5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Sh3tc2Q80VA5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sh3tc2Q80VA5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Sh3tc2Q80VA5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Sh3tc2Q80VA5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.25■■□□□ 1.47
Sh3tc2Q80VA5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3tc2Q80VA5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3tc2Q80VA5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3tc2Q80VA5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3tc2Q80VA5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sh3tc2Q80VA5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sh3tc2Q80VA5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sh3tc2Q80VA5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sh3tc2Q80VA5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sh3tc2Q80VA5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Sh3tc2Q80VA5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Sh3tc2Q80VA5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh3tc2Q80VA5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Sh3tc2Q80VA5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
Sh3tc2Q80VA5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.21■■□□□ 1.47
Sh3tc2Q80VA5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sh3tc2Q80VA5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.21■■□□□ 1.47
Sh3tc2Q80VA5 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.21■■□□□ 1.47
Sh3tc2Q80VA5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.21■■□□□ 1.47
Sh3tc2Q80VA5 Gm9959-201ENSMUST00000068277 390 ntBASIC24.21■■□□□ 1.47
Sh3tc2Q80VA5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Sh3tc2Q80VA5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.2■■□□□ 1.46
Sh3tc2Q80VA5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.2■■□□□ 1.46
Sh3tc2Q80VA5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sh3tc2Q80VA5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sh3tc2Q80VA5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sh3tc2Q80VA5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sh3tc2Q80VA5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sh3tc2Q80VA5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Sh3tc2Q80VA5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.18■■□□□ 1.46
Sh3tc2Q80VA5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sh3tc2Q80VA5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sh3tc2Q80VA5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Sh3tc2Q80VA5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sh3tc2Q80VA5 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.17■■□□□ 1.46
Sh3tc2Q80VA5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Sh3tc2Q80VA5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sh3tc2Q80VA5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sh3tc2Q80VA5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sh3tc2Q80VA5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.16■■□□□ 1.46
Sh3tc2Q80VA5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Sh3tc2Q80VA5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Sh3tc2Q80VA5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.16■■□□□ 1.46
Sh3tc2Q80VA5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sh3tc2Q80VA5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sh3tc2Q80VA5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Sh3tc2Q80VA5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sh3tc2Q80VA5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sh3tc2Q80VA5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sh3tc2Q80VA5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Sh3tc2Q80VA5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sh3tc2Q80VA5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.13■■□□□ 1.45
Sh3tc2Q80VA5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sh3tc2Q80VA5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Sh3tc2Q80VA5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sh3tc2Q80VA5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Sh3tc2Q80VA5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Sh3tc2Q80VA5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms