Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
Pds5bQ4VA53 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
Pds5bQ4VA53 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
Pds5bQ4VA53 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC40.84■■■■■ 4.13
Pds5bQ4VA53 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC40.84■■■■■ 4.13
Pds5bQ4VA53 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC40.83■■■■■ 4.13
Pds5bQ4VA53 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC40.83■■■■■ 4.13
Pds5bQ4VA53 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC40.83■■■■■ 4.13
Pds5bQ4VA53 Gm9847-201ENSMUST00000052528 599 ntBASIC40.83■■■■■ 4.13
Pds5bQ4VA53 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC40.82■■■■■ 4.12
Pds5bQ4VA53 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC40.82■■■■■ 4.12
Pds5bQ4VA53 Gm37847-201ENSMUST00000192163 1497 ntBASIC40.81■■■■■ 4.12
Pds5bQ4VA53 Gm31748-201ENSMUST00000194938 1497 ntBASIC40.81■■■■■ 4.12
Pds5bQ4VA53 Gm43445-201ENSMUST00000198564 2091 ntBASIC40.81■■■■■ 4.12
Pds5bQ4VA53 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
Pds5bQ4VA53 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC40.81■■■■■ 4.12
Pds5bQ4VA53 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC40.8■■■■■ 4.12
Pds5bQ4VA53 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC40.79■■■■■ 4.12
Pds5bQ4VA53 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
Pds5bQ4VA53 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
Pds5bQ4VA53 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
Pds5bQ4VA53 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
Pds5bQ4VA53 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC40.78■■■■■ 4.12
Pds5bQ4VA53 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
Pds5bQ4VA53 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC40.76■■■■■ 4.12
Pds5bQ4VA53 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC40.76■■■■■ 4.12
Pds5bQ4VA53 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC40.76■■■■■ 4.11
Pds5bQ4VA53 Slc35b2-207ENSMUST00000226086 850 ntBASIC40.76■■■■■ 4.11
Pds5bQ4VA53 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC40.75■■■■■ 4.11
Pds5bQ4VA53 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC40.74■■■■■ 4.11
Pds5bQ4VA53 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC40.74■■■■■ 4.11
Pds5bQ4VA53 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC40.74■■■■■ 4.11
Pds5bQ4VA53 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC40.74■■■■■ 4.11
Pds5bQ4VA53 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC40.73■■■■■ 4.11
Pds5bQ4VA53 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC40.73■■■■■ 4.11
Pds5bQ4VA53 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC40.73■■■■■ 4.11
Pds5bQ4VA53 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC40.72■■■■■ 4.11
Pds5bQ4VA53 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC40.72■■■■■ 4.11
Pds5bQ4VA53 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
Pds5bQ4VA53 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
Pds5bQ4VA53 Gm7417-201ENSMUST00000192950 473 ntBASIC40.72■■■■■ 4.11
Pds5bQ4VA53 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC40.72■■■■■ 4.11
Pds5bQ4VA53 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC40.71■■■■■ 4.11
Pds5bQ4VA53 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC40.7■■■■■ 4.11
Pds5bQ4VA53 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC40.69■■■■■ 4.1
Pds5bQ4VA53 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
Pds5bQ4VA53 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC40.67■■■■■ 4.1
Pds5bQ4VA53 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC40.67■■■■■ 4.1
Pds5bQ4VA53 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC40.67■■■■■ 4.1
Pds5bQ4VA53 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC40.66■■■■■ 4.1
Pds5bQ4VA53 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC40.66■■■■■ 4.1
Pds5bQ4VA53 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC40.65■■■■■ 4.1
Pds5bQ4VA53 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC40.64■■■■■ 4.1
Pds5bQ4VA53 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC40.63■■■■■ 4.09
Pds5bQ4VA53 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC40.63■■■■■ 4.09
Pds5bQ4VA53 Gm4419-202ENSMUST00000226239 1431 ntBASIC40.63■■■■■ 4.09
Pds5bQ4VA53 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
Pds5bQ4VA53 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC40.6■■■■■ 4.09
Pds5bQ4VA53 Gm22238-201ENSMUST00000175222 88 ntBASIC40.6■■■■■ 4.09
Pds5bQ4VA53 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC40.59■■■■■ 4.09
Pds5bQ4VA53 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC40.59■■■■■ 4.09
Pds5bQ4VA53 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC40.59■■■■■ 4.09
Pds5bQ4VA53 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
Pds5bQ4VA53 Gm16464-201ENSMUST00000117815 1095 ntBASIC40.59■■■■■ 4.09
Pds5bQ4VA53 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC40.59■■■■■ 4.09
Pds5bQ4VA53 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
Pds5bQ4VA53 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC40.57■■■■■ 4.09
Pds5bQ4VA53 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
Pds5bQ4VA53 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
Pds5bQ4VA53 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.08
Pds5bQ4VA53 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
Pds5bQ4VA53 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC40.55■■■■■ 4.08
Pds5bQ4VA53 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC40.55■■■■■ 4.08
Pds5bQ4VA53 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
Pds5bQ4VA53 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
Pds5bQ4VA53 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
Pds5bQ4VA53 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
Pds5bQ4VA53 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC40.53■■■■■ 4.08
Pds5bQ4VA53 Appbp2os-202ENSMUST00000206972 447 ntBASIC40.52■■■■■ 4.08
Pds5bQ4VA53 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
Pds5bQ4VA53 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC40.51■■■■■ 4.07
Pds5bQ4VA53 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC40.5■■■■■ 4.07
Pds5bQ4VA53 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
Pds5bQ4VA53 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC40.5■■■■■ 4.07
Pds5bQ4VA53 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC40.49■■■■■ 4.07
Pds5bQ4VA53 Gm12922-201ENSMUST00000120626 809 ntBASIC40.49■■■■■ 4.07
Pds5bQ4VA53 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC40.48■■■■■ 4.07
Pds5bQ4VA53 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC40.48■■■■■ 4.07
Pds5bQ4VA53 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
Pds5bQ4VA53 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC40.47■■■■■ 4.07
Pds5bQ4VA53 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
Pds5bQ4VA53 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
Pds5bQ4VA53 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
Pds5bQ4VA53 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC40.45■■■■■ 4.07
Pds5bQ4VA53 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC40.45■■■■■ 4.07
Pds5bQ4VA53 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
Pds5bQ4VA53 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
Pds5bQ4VA53 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
Pds5bQ4VA53 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC40.43■■■■■ 4.06
Pds5bQ4VA53 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC40.43■■■■■ 4.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms