Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Notch1Q01705 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Notch1Q01705 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.4■□□□□ 0.22
Notch1Q01705 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Notch1Q01705 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Notch1Q01705 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Notch1Q01705 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.39■□□□□ 0.21
Notch1Q01705 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Notch1Q01705 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Notch1Q01705 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Notch1Q01705 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Notch1Q01705 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Notch1Q01705 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Notch1Q01705 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Notch1Q01705 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Notch1Q01705 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Notch1Q01705 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.38■□□□□ 0.21
Notch1Q01705 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Notch1Q01705 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Notch1Q01705 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Notch1Q01705 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Notch1Q01705 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.37■□□□□ 0.21
Notch1Q01705 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Notch1Q01705 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Notch1Q01705 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Notch1Q01705 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Notch1Q01705 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Notch1Q01705 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.36■□□□□ 0.21
Notch1Q01705 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Notch1Q01705 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Notch1Q01705 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Notch1Q01705 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.35■□□□□ 0.21
Notch1Q01705 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Notch1Q01705 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Notch1Q01705 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.35■□□□□ 0.21
Notch1Q01705 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.35■□□□□ 0.21
Notch1Q01705 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Notch1Q01705 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.35■□□□□ 0.21
Notch1Q01705 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Notch1Q01705 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Notch1Q01705 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Notch1Q01705 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Notch1Q01705 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.33■□□□□ 0.2
Notch1Q01705 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Notch1Q01705 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Notch1Q01705 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.33■□□□□ 0.2
Notch1Q01705 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.32■□□□□ 0.2
Notch1Q01705 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Notch1Q01705 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.32■□□□□ 0.2
Notch1Q01705 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.32■□□□□ 0.2
Notch1Q01705 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Notch1Q01705 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Notch1Q01705 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Notch1Q01705 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.3■□□□□ 0.2
Notch1Q01705 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Notch1Q01705 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.3■□□□□ 0.2
Notch1Q01705 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.3■□□□□ 0.2
Notch1Q01705 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch1Q01705 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.29■□□□□ 0.2
Notch1Q01705 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Notch1Q01705 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Notch1Q01705 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.29■□□□□ 0.2
Notch1Q01705 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Notch1Q01705 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Notch1Q01705 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.28■□□□□ 0.2
Notch1Q01705 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Notch1Q01705 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.28■□□□□ 0.2
Notch1Q01705 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.28■□□□□ 0.2
Notch1Q01705 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Notch1Q01705 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Notch1Q01705 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Notch1Q01705 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.27■□□□□ 0.2
Notch1Q01705 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.27■□□□□ 0.2
Notch1Q01705 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Notch1Q01705 Gm7417-201ENSMUST00000192950 473 ntBASIC16.27■□□□□ 0.2
Notch1Q01705 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Notch1Q01705 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Notch1Q01705 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Notch1Q01705 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Notch1Q01705 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Notch1Q01705 Gm9847-201ENSMUST00000052528 599 ntBASIC16.26■□□□□ 0.19
Notch1Q01705 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.26■□□□□ 0.19
Notch1Q01705 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Notch1Q01705 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Notch1Q01705 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Notch1Q01705 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Notch1Q01705 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.25■□□□□ 0.19
Notch1Q01705 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.25■□□□□ 0.19
Notch1Q01705 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Notch1Q01705 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.25■□□□□ 0.19
Notch1Q01705 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Notch1Q01705 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Notch1Q01705 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Notch1Q01705 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Notch1Q01705 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch1Q01705 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch1Q01705 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Notch1Q01705 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.24■□□□□ 0.19
Notch1Q01705 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Notch1Q01705 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms