Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SgcdP82347 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SgcdP82347 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SgcdP82347 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.46■□□□□ 0.87
SgcdP82347 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SgcdP82347 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SgcdP82347 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SgcdP82347 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.45■□□□□ 0.86
SgcdP82347 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SgcdP82347 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SgcdP82347 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SgcdP82347 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SgcdP82347 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SgcdP82347 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SgcdP82347 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SgcdP82347 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
SgcdP82347 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SgcdP82347 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SgcdP82347 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SgcdP82347 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SgcdP82347 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SgcdP82347 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SgcdP82347 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SgcdP82347 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SgcdP82347 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SgcdP82347 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SgcdP82347 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SgcdP82347 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SgcdP82347 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SgcdP82347 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SgcdP82347 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SgcdP82347 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SgcdP82347 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SgcdP82347 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SgcdP82347 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SgcdP82347 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SgcdP82347 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SgcdP82347 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SgcdP82347 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SgcdP82347 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SgcdP82347 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.38■□□□□ 0.85
SgcdP82347 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.38■□□□□ 0.85
SgcdP82347 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SgcdP82347 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcdP82347 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcdP82347 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcdP82347 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcdP82347 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcdP82347 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcdP82347 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcdP82347 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SgcdP82347 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SgcdP82347 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SgcdP82347 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.36■□□□□ 0.85
SgcdP82347 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SgcdP82347 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SgcdP82347 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SgcdP82347 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SgcdP82347 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.36■□□□□ 0.85
SgcdP82347 Gm11599-201ENSMUST00000118720 878 ntBASIC20.35■□□□□ 0.85
SgcdP82347 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SgcdP82347 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.35■□□□□ 0.85
SgcdP82347 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SgcdP82347 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SgcdP82347 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.35■□□□□ 0.85
SgcdP82347 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
SgcdP82347 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SgcdP82347 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcdP82347 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcdP82347 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcdP82347 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcdP82347 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SgcdP82347 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.33■□□□□ 0.85
SgcdP82347 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.33■□□□□ 0.85
SgcdP82347 Gm30023-201ENSMUST00000197970 889 ntBASIC20.33■□□□□ 0.85
SgcdP82347 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SgcdP82347 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SgcdP82347 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.33■□□□□ 0.84
SgcdP82347 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SgcdP82347 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
SgcdP82347 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SgcdP82347 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SgcdP82347 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SgcdP82347 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SgcdP82347 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SgcdP82347 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.31■□□□□ 0.84
SgcdP82347 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SgcdP82347 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.31■□□□□ 0.84
SgcdP82347 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SgcdP82347 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SgcdP82347 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.3■□□□□ 0.84
SgcdP82347 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SgcdP82347 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SgcdP82347 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SgcdP82347 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SgcdP82347 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.3■□□□□ 0.84
SgcdP82347 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SgcdP82347 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.3■□□□□ 0.84
SgcdP82347 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
SgcdP82347 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms