Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gcm1P70348 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gcm1P70348 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.59■□□□□ 0.57
Gcm1P70348 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.59■□□□□ 0.57
Gcm1P70348 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.59■□□□□ 0.57
Gcm1P70348 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gcm1P70348 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gcm1P70348 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gcm1P70348 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gcm1P70348 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.58■□□□□ 0.56
Gcm1P70348 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gcm1P70348 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Gcm1P70348 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.58■□□□□ 0.56
Gcm1P70348 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gcm1P70348 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gcm1P70348 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gcm1P70348 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gcm1P70348 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gcm1P70348 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gcm1P70348 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Gcm1P70348 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gcm1P70348 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gcm1P70348 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gcm1P70348 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gcm1P70348 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Gcm1P70348 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gcm1P70348 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gcm1P70348 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gcm1P70348 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gcm1P70348 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gcm1P70348 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gcm1P70348 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gcm1P70348 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gcm1P70348 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gcm1P70348 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gcm1P70348 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gcm1P70348 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gcm1P70348 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gcm1P70348 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.55■□□□□ 0.56
Gcm1P70348 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gcm1P70348 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.54■□□□□ 0.56
Gcm1P70348 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gcm1P70348 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Gcm1P70348 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gcm1P70348 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gcm1P70348 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gcm1P70348 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gcm1P70348 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gcm1P70348 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gcm1P70348 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gcm1P70348 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gcm1P70348 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gcm1P70348 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.53■□□□□ 0.56
Gcm1P70348 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gcm1P70348 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gcm1P70348 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gcm1P70348 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gcm1P70348 Gm10420-201ENSMUST00000121713 882 ntBASIC18.52■□□□□ 0.56
Gcm1P70348 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.52■□□□□ 0.56
Gcm1P70348 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.52■□□□□ 0.56
Gcm1P70348 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gcm1P70348 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gcm1P70348 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gcm1P70348 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gcm1P70348 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gcm1P70348 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gcm1P70348 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gcm1P70348 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gcm1P70348 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gcm1P70348 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gcm1P70348 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gcm1P70348 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gcm1P70348 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gcm1P70348 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gcm1P70348 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gcm1P70348 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.5■□□□□ 0.55
Gcm1P70348 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.49■□□□□ 0.55
Gcm1P70348 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gcm1P70348 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gcm1P70348 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.49■□□□□ 0.55
Gcm1P70348 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.49■□□□□ 0.55
Gcm1P70348 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gcm1P70348 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gcm1P70348 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gcm1P70348 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gcm1P70348 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gcm1P70348 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gcm1P70348 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gcm1P70348 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gcm1P70348 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gcm1P70348 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gcm1P70348 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gcm1P70348 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gcm1P70348 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.46■□□□□ 0.55
Gcm1P70348 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.46■□□□□ 0.55
Gcm1P70348 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gcm1P70348 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gcm1P70348 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Gcm1P70348 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gcm1P70348 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms