Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YPL277CYPL277C 1464 nt7.61□□□□□ -1.19
HDA1P53973 IMG1YCR046C 510 nt7.6□□□□□ -1.19
HDA1P53973 YSC83YHR017W 1158 nt7.6□□□□□ -1.19
HDA1P53973 SWD1YAR003W 1281 nt7.6□□□□□ -1.19
HDA1P53973 YLR361C-AYLR361C-A 297 nt7.6□□□□□ -1.19
HDA1P53973 ERS1YCR075C 783 nt7.59□□□□□ -1.19
HDA1P53973 HEM2YGL040C 1029 nt7.59□□□□□ -1.19
HDA1P53973 POB3YML069W 1659 nt7.59□□□□□ -1.19
HDA1P53973 COQ1YBR003W 1422 nt7.59□□□□□ -1.19
HDA1P53973 YEL023CYEL023C 2049 nt7.58□□□□□ -1.2
HDA1P53973 ARP10YDR106W 855 nt7.58□□□□□ -1.2
HDA1P53973 YMR147WYMR147W 672 nt7.58□□□□□ -1.2
HDA1P53973 SCO2YBR024W 906 nt7.58□□□□□ -1.2
HDA1P53973 STT3YGL022W 2157 nt7.58□□□□□ -1.2
HDA1P53973 CCT3YJL014W 1605 nt7.58□□□□□ -1.2
HDA1P53973 APM1YPL259C 1428 nt7.58□□□□□ -1.2
HDA1P53973 ECM10YEL030W 1935 nt7.58□□□□□ -1.2
HDA1P53973 YHR020WYHR020W 2067 nt7.58□□□□□ -1.2
HDA1P53973 YDL177CYDL177C 513 nt7.57□□□□□ -1.2
HDA1P53973 YDR187CYDR187C 519 nt7.57□□□□□ -1.2
HDA1P53973 SEM1YDR363W-A 270 nt7.57□□□□□ -1.2
HDA1P53973 RFS1YBR052C 633 nt7.57□□□□□ -1.2
HDA1P53973 ERG8YMR220W 1356 nt7.57□□□□□ -1.2
HDA1P53973 DRE2YKR071C 1047 nt7.56□□□□□ -1.2
HDA1P53973 RNH1YMR234W 1047 nt7.56□□□□□ -1.2
HDA1P53973 IRC11YOR013W 471 nt7.56□□□□□ -1.2
HDA1P53973 OSW2YLR054C 2175 nt7.55□□□□□ -1.2
HDA1P53973 STF1YDL130W-A 261 nt7.55□□□□□ -1.2
HDA1P53973 MHT1YLL062C 975 nt7.55□□□□□ -1.2
HDA1P53973 CUE4YML101C 354 nt7.55□□□□□ -1.2
HDA1P53973 CDC1YDR182W 1476 nt7.55□□□□□ -1.2
HDA1P53973 NPL6YMR091C 1308 nt7.54□□□□□ -1.2
HDA1P53973 MTR3YGR158C 753 nt7.54□□□□□ -1.2
HDA1P53973 YJL107CYJL107C 1164 nt7.54□□□□□ -1.2
HDA1P53973 IMD1YAR073W 1212 nt7.54□□□□□ -1.2
HDA1P53973 TMA46YOR091W 1038 nt7.54□□□□□ -1.2
HDA1P53973 YPL136WYPL136W 369 nt7.54□□□□□ -1.2
HDA1P53973 YHR131CYHR131C 2553 nt7.54□□□□□ -1.2
HDA1P53973 YMR034CYMR034C 1305 nt7.53□□□□□ -1.2
HDA1P53973 GSH1YJL101C 2037 nt7.53□□□□□ -1.2
HDA1P53973 OM45YIL136W 1182 nt7.53□□□□□ -1.2
HDA1P53973 AQR1YNL065W 1761 nt7.53□□□□□ -1.2
HDA1P53973 YJL045WYJL045W 1905 nt7.52□□□□□ -1.2
HDA1P53973 YBR241CYBR241C 1467 nt7.52□□□□□ -1.21
HDA1P53973 RSM23YGL129C 1353 nt7.52□□□□□ -1.21
HDA1P53973 AIM2YAL049C 741 nt7.52□□□□□ -1.21
HDA1P53973 QRI5YLR204W 336 nt7.52□□□□□ -1.21
HDA1P53973 YBR027CYBR027C 333 nt7.52□□□□□ -1.21
HDA1P53973 HHY1YEL059W 309 nt7.51□□□□□ -1.21
HDA1P53973 YRB2YIL063C 984 nt7.51□□□□□ -1.21
HDA1P53973 TAE1YBR261C 699 nt7.51□□□□□ -1.21
HDA1P53973 HBN1YCL026C-B 582 nt7.51□□□□□ -1.21
HDA1P53973 CCT8YJL008C 1707 nt7.51□□□□□ -1.21
HDA1P53973 MAK32YCR019W 1092 nt7.5□□□□□ -1.21
HDA1P53973 YEL075W-AYEL075W-A 612 nt7.5□□□□□ -1.21
HDA1P53973 HIS1YER055C 894 nt7.5□□□□□ -1.21
HDA1P53973 RDN5-2RDN5-2 119 nt7.5□□□□□ -1.21
HDA1P53973 RDN5-3RDN5-3 119 nt7.5□□□□□ -1.21
HDA1P53973 RDN5-4RDN5-4 119 nt7.5□□□□□ -1.21
HDA1P53973 RDN5-5RDN5-5 119 nt7.5□□□□□ -1.21
HDA1P53973 YLR463CYLR463C 552 nt7.5□□□□□ -1.21
HDA1P53973 ARC35YNR035C 1029 nt7.5□□□□□ -1.21
HDA1P53973 MCH2YKL221W 1422 nt7.5□□□□□ -1.21
HDA1P53973 PPM2YOL141W 2088 nt7.5□□□□□ -1.21
HDA1P53973 tG(GCC)BtG(GCC)B 71 nt7.49□□□□□ -1.21
HDA1P53973 SUF16tG(GCC)C 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)D1tG(GCC)D1 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)D2tG(GCC)D2 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)EtG(GCC)E 71 nt7.49□□□□□ -1.21
HDA1P53973 SUF20tG(GCC)F1 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)F2tG(GCC)F2 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)G1tG(GCC)G1 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)G2tG(GCC)G2 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)J1tG(GCC)J1 71 nt7.49□□□□□ -1.21
HDA1P53973 SUF23tG(GCC)J2 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)MtG(GCC)M 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)O1tG(GCC)O1 71 nt7.49□□□□□ -1.21
HDA1P53973 SUF17tG(GCC)O2 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)P1tG(GCC)P1 71 nt7.49□□□□□ -1.21
HDA1P53973 tG(GCC)P2tG(GCC)P2 71 nt7.49□□□□□ -1.21
HDA1P53973 YFL013W-AYFL013W-A 804 nt7.49□□□□□ -1.21
HDA1P53973 PAC10YGR078C 600 nt7.49□□□□□ -1.21
HDA1P53973 YML018CYML018C 1182 nt7.49□□□□□ -1.21
HDA1P53973 SIR2YDL042C 1689 nt7.48□□□□□ -1.21
HDA1P53973 CUP2YGL166W 678 nt7.48□□□□□ -1.21
HDA1P53973 YHR213W-BYHR213W-B 300 nt7.48□□□□□ -1.21
HDA1P53973 YAR064WYAR064W 300 nt7.48□□□□□ -1.21
HDA1P53973 MPC2YHR162W 390 nt7.47□□□□□ -1.21
HDA1P53973 DFR1YOR236W 636 nt7.47□□□□□ -1.21
HDA1P53973 SGF29YCL010C 780 nt7.47□□□□□ -1.21
HDA1P53973 YNR014WYNR014W 639 nt7.46□□□□□ -1.22
HDA1P53973 CTF19YPL018W 1110 nt7.46□□□□□ -1.22
HDA1P53973 EHD3YDR036C 1503 nt7.46□□□□□ -1.22
HDA1P53973 SEC23YPR181C 2307 nt7.45□□□□□ -1.22
HDA1P53973 MSO1YNR049C 633 nt7.45□□□□□ -1.22
HDA1P53973 YNR068CYNR068C 819 nt7.45□□□□□ -1.22
HDA1P53973 EFM1YHL039W 1758 nt7.45□□□□□ -1.22
HDA1P53973 YKR023WYKR023W 1593 nt7.45□□□□□ -1.22
HDA1P53973 TAH11YJR046W 1815 nt7.45□□□□□ -1.22
HDA1P53973 YGR054WYGR054W 1929 nt7.44□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms