Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl3P27659 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl3P27659 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl3P27659 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Rpl3P27659 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rpl3P27659 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.12■□□□□ 0.97
Rpl3P27659 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl3P27659 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rpl3P27659 Gm45364-201ENSMUST00000210883 159 ntBASIC21.1■□□□□ 0.97
Rpl3P27659 Terc-201ENSMUST00000082862 423 ntBASIC21.1■□□□□ 0.97
Rpl3P27659 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rpl3P27659 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.1■□□□□ 0.97
Rpl3P27659 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.1■□□□□ 0.97
Rpl3P27659 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rpl3P27659 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl3P27659 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl3P27659 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl3P27659 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.08■□□□□ 0.97
Rpl3P27659 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl3P27659 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Rpl3P27659 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Rpl3P27659 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Rpl3P27659 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpl3P27659 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl3P27659 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.07■□□□□ 0.96
Rpl3P27659 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Rpl3P27659 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl3P27659 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl3P27659 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl3P27659 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl3P27659 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.06■□□□□ 0.96
Rpl3P27659 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl3P27659 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl3P27659 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.05■□□□□ 0.96
Rpl3P27659 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl3P27659 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl3P27659 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl3P27659 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Rpl3P27659 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl3P27659 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.04■□□□□ 0.96
Rpl3P27659 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl3P27659 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl3P27659 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl3P27659 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rpl3P27659 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rpl3P27659 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl3P27659 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl3P27659 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl3P27659 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl3P27659 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl3P27659 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpl3P27659 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpl3P27659 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.02■□□□□ 0.96
Rpl3P27659 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rpl3P27659 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpl3P27659 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.02■□□□□ 0.96
Rpl3P27659 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rpl3P27659 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl3P27659 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl3P27659 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.01■□□□□ 0.95
Rpl3P27659 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl3P27659 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl3P27659 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rpl3P27659 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.01■□□□□ 0.95
Rpl3P27659 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl3P27659 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl3P27659 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl3P27659 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl3P27659 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpl3P27659 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rpl3P27659 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rpl3P27659 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpl3P27659 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl3P27659 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl3P27659 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl3P27659 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl3P27659 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.99■□□□□ 0.95
Rpl3P27659 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Rpl3P27659 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl3P27659 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.98■□□□□ 0.95
Rpl3P27659 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rpl3P27659 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpl3P27659 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.98■□□□□ 0.95
Rpl3P27659 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpl3P27659 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpl3P27659 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rpl3P27659 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpl3P27659 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl3P27659 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl3P27659 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Rpl3P27659 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl3P27659 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl3P27659 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpl3P27659 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpl3P27659 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rpl3P27659 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.95■□□□□ 0.94
Rpl3P27659 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.95■□□□□ 0.94
Rpl3P27659 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpl3P27659 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpl3P27659 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms