Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.75■□□□□ 0.59
Col8a2P25318 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.75■□□□□ 0.59
Col8a2P25318 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col8a2P25318 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col8a2P25318 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col8a2P25318 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col8a2P25318 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col8a2P25318 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col8a2P25318 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col8a2P25318 Gm44428-201ENSMUST00000204474 874 ntBASIC18.73■□□□□ 0.59
Col8a2P25318 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col8a2P25318 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col8a2P25318 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col8a2P25318 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.72■□□□□ 0.59
Col8a2P25318 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Col8a2P25318 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Col8a2P25318 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col8a2P25318 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Col8a2P25318 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.72■□□□□ 0.59
Col8a2P25318 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col8a2P25318 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col8a2P25318 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.71■□□□□ 0.59
Col8a2P25318 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col8a2P25318 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col8a2P25318 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col8a2P25318 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Col8a2P25318 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.7■□□□□ 0.58
Col8a2P25318 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col8a2P25318 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.7■□□□□ 0.58
Col8a2P25318 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col8a2P25318 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col8a2P25318 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col8a2P25318 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col8a2P25318 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col8a2P25318 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.68■□□□□ 0.58
Col8a2P25318 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col8a2P25318 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col8a2P25318 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col8a2P25318 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col8a2P25318 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col8a2P25318 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col8a2P25318 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col8a2P25318 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col8a2P25318 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col8a2P25318 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col8a2P25318 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col8a2P25318 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.66■□□□□ 0.58
Col8a2P25318 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col8a2P25318 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col8a2P25318 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col8a2P25318 Gm10420-201ENSMUST00000121713 882 ntBASIC18.65■□□□□ 0.58
Col8a2P25318 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col8a2P25318 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col8a2P25318 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col8a2P25318 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col8a2P25318 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col8a2P25318 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col8a2P25318 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.64■□□□□ 0.57
Col8a2P25318 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col8a2P25318 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col8a2P25318 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col8a2P25318 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col8a2P25318 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col8a2P25318 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col8a2P25318 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.63■□□□□ 0.57
Col8a2P25318 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col8a2P25318 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.63■□□□□ 0.57
Col8a2P25318 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col8a2P25318 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col8a2P25318 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col8a2P25318 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col8a2P25318 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col8a2P25318 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col8a2P25318 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col8a2P25318 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col8a2P25318 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col8a2P25318 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col8a2P25318 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col8a2P25318 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col8a2P25318 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.6■□□□□ 0.57
Col8a2P25318 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col8a2P25318 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col8a2P25318 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col8a2P25318 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col8a2P25318 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col8a2P25318 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.59■□□□□ 0.57
Col8a2P25318 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Col8a2P25318 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col8a2P25318 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col8a2P25318 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col8a2P25318 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms