Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nid1P10493 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.96■□□□□ 0.95
Nid1P10493 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nid1P10493 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nid1P10493 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.95■□□□□ 0.94
Nid1P10493 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Nid1P10493 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nid1P10493 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nid1P10493 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.95■□□□□ 0.94
Nid1P10493 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.94■□□□□ 0.94
Nid1P10493 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nid1P10493 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nid1P10493 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nid1P10493 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nid1P10493 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nid1P10493 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nid1P10493 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nid1P10493 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nid1P10493 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nid1P10493 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Nid1P10493 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.92■□□□□ 0.94
Nid1P10493 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nid1P10493 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nid1P10493 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nid1P10493 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nid1P10493 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nid1P10493 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Nid1P10493 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nid1P10493 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.9■□□□□ 0.94
Nid1P10493 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nid1P10493 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nid1P10493 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nid1P10493 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.89■□□□□ 0.94
Nid1P10493 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.89■□□□□ 0.93
Nid1P10493 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nid1P10493 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.89■□□□□ 0.93
Nid1P10493 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.88■□□□□ 0.93
Nid1P10493 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Nid1P10493 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nid1P10493 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nid1P10493 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nid1P10493 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nid1P10493 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nid1P10493 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nid1P10493 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nid1P10493 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nid1P10493 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Nid1P10493 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nid1P10493 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.86■□□□□ 0.93
Nid1P10493 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nid1P10493 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nid1P10493 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nid1P10493 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nid1P10493 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nid1P10493 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nid1P10493 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nid1P10493 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nid1P10493 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nid1P10493 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nid1P10493 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nid1P10493 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Nid1P10493 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Nid1P10493 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nid1P10493 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nid1P10493 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nid1P10493 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nid1P10493 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.83■□□□□ 0.93
Nid1P10493 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.83■□□□□ 0.92
Nid1P10493 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nid1P10493 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nid1P10493 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nid1P10493 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid1P10493 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.82■□□□□ 0.92
Nid1P10493 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.82■□□□□ 0.92
Nid1P10493 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nid1P10493 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid1P10493 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid1P10493 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid1P10493 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Nid1P10493 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid1P10493 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.81■□□□□ 0.92
Nid1P10493 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.8■□□□□ 0.92
Nid1P10493 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nid1P10493 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Nid1P10493 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nid1P10493 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nid1P10493 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nid1P10493 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms