Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh2d1aO88890 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh2d1aO88890 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh2d1aO88890 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh2d1aO88890 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh2d1aO88890 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh2d1aO88890 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.62■□□□□ 0.09
Sh2d1aO88890 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sh2d1aO88890 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh2d1aO88890 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh2d1aO88890 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sh2d1aO88890 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh2d1aO88890 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sh2d1aO88890 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.6■□□□□ 0.09
Sh2d1aO88890 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2d1aO88890 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2d1aO88890 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sh2d1aO88890 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2d1aO88890 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh2d1aO88890 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2d1aO88890 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2d1aO88890 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2d1aO88890 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2d1aO88890 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2d1aO88890 Mir3960-201ENSMUST00000198213 73 ntBASIC15.59■□□□□ 0.09
Sh2d1aO88890 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Sh2d1aO88890 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2d1aO88890 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2d1aO88890 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh2d1aO88890 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d1aO88890 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.58■□□□□ 0.08
Sh2d1aO88890 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sh2d1aO88890 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d1aO88890 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.58■□□□□ 0.08
Sh2d1aO88890 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d1aO88890 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2d1aO88890 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d1aO88890 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d1aO88890 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Sh2d1aO88890 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d1aO88890 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.57■□□□□ 0.08
Sh2d1aO88890 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d1aO88890 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2d1aO88890 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh2d1aO88890 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.56■□□□□ 0.08
Sh2d1aO88890 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d1aO88890 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sh2d1aO88890 Gm45364-201ENSMUST00000210883 159 ntBASIC15.56■□□□□ 0.08
Sh2d1aO88890 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sh2d1aO88890 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d1aO88890 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Sh2d1aO88890 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d1aO88890 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2d1aO88890 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Sh2d1aO88890 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Sh2d1aO88890 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh2d1aO88890 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Sh2d1aO88890 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.54■□□□□ 0.08
Sh2d1aO88890 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.54■□□□□ 0.08
Sh2d1aO88890 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.54■□□□□ 0.08
Sh2d1aO88890 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d1aO88890 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sh2d1aO88890 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh2d1aO88890 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Sh2d1aO88890 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh2d1aO88890 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh2d1aO88890 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.53■□□□□ 0.08
Sh2d1aO88890 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh2d1aO88890 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh2d1aO88890 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh2d1aO88890 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh2d1aO88890 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh2d1aO88890 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.52■□□□□ 0.08
Sh2d1aO88890 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.52■□□□□ 0.08
Sh2d1aO88890 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh2d1aO88890 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.51■□□□□ 0.07
Sh2d1aO88890 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.51■□□□□ 0.07
Sh2d1aO88890 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh2d1aO88890 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms